Detailed information of deep learning profile BP001020.1

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This page shows detailed deep learning-derived predictions and motifs for STAT3 in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: STAT3
Model ID: BP001020.1
Cell line/tissue: MCF 10A
Class: STAT domain factors
Family: STAT factors
JASPAR ID: MA0144.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P40763  
Source: ENCSR000DOQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.07 0.07 0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.00 0.00 -0.00 0.00 0.05 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.04 0.09 0.06 0.00 -0.00 0.00 -0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.05 0.04 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 ]

Frequency matrix

       
A [ 775 846 875 874 829 796 869 909 814 817 940 816 809 771 889 734 754 721 640 1198 535 113 119 396 194 235 98 35 3028 3106 1308 568 658 867 676 721 739 723 818 835 939 882 758 724 803 697 760 896 824 932 ]
C [ 717 696 699 639 663 700 671 684 647 655 565 597 705 814 786 904 780 757 966 516 952 71 15 2475 33 136 3 11 84 1 337 612 802 740 734 732 727 806 754 821 757 643 631 695 871 896 758 645 625 668 ]
G [ 813 763 757 794 751 870 845 795 770 739 816 900 709 806 671 639 887 775 887 746 595 129 708 96 124 2451 3018 2806 0 1 868 637 1093 810 831 808 860 882 776 683 612 700 684 704 722 704 726 820 858 696 ]
T [ 818 818 792 816 880 757 738 735 892 912 802 810 900 732 777 846 702 870 630 663 1041 2810 2281 156 2772 301 4 271 11 15 610 1306 570 706 882 862 797 712 775 784 815 898 1050 1000 727 826 879 762 816 827 ]

Hypothetical CWM

   
A [ -0.01 -0.00 0.01 -0.01 -0.02 -0.01 0.01 -0.05 -0.02 0.01 -0.02 0.07 0.07 0.02 -0.01 -0.00 -0.00 ]
C [ 0.02 0.02 0.00 0.01 -0.03 -0.07 0.06 0.10 0.05 -0.01 -0.04 0.01 -0.03 -0.01 0.01 0.02 0.02 ]
G [ 0.01 0.01 0.01 0.00 -0.01 0.02 -0.03 -0.01 0.05 0.09 0.07 -0.08 -0.04 0.01 -0.00 0.02 0.01 ]
T [ -0.00 -0.00 -0.00 0.01 0.06 0.05 -0.01 0.00 -0.01 -0.05 0.02 -0.01 -0.02 -0.00 0.02 -0.00 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 14825

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6061

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5672

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 658

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 559

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 413

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 333

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 176

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 115

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 93

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 43

CWM

PFM

     

HCWM

3 profiles found for the same TF (STAT3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001021.1 STAT3 ENCSR000DOZ MCF 10A Homo sapiens MA0144.3
BP001022.1 STAT3 ENCSR000DPB MCF 10A Homo sapiens MA0144.3
BP001023.1 STAT3 ENCSR000EDC HeLa-S3 Homo sapiens MA0144.3
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