Detailed information of deep learning profile BP001022.1

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This page shows detailed deep learning-derived predictions and motifs for STAT3 in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: STAT3
Model ID: BP001022.1
Cell line/tissue: MCF 10A
Class: STAT domain factors
Family: STAT factors
JASPAR ID: MA0144.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P40763  
Source: ENCSR000DPB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.01 -0.00 0.00 0.07 0.08 0.01 -0.00 -0.00 0.00 ]
C [ 0.00 0.01 0.00 0.00 -0.00 -0.00 0.03 0.06 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.02 0.10 0.06 0.00 -0.00 0.00 -0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.05 0.03 -0.00 -0.00 -0.01 0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 ]

Frequency matrix

       
A [ 2624 2680 2678 2740 2776 2712 2678 2813 2573 2605 2610 2607 2449 2616 2423 2237 3317 2239 1177 1266 2780 280 3260 266 177 9904 10120 4275 1842 2199 2832 2247 2379 2436 2504 2690 2602 2813 2692 2547 2611 2525 2465 2478 2762 2693 2766 2824 2738 2686 ]
C [ 2421 2411 2415 2404 2340 2327 2374 2150 2252 2445 2609 2718 2710 2457 2638 2920 2051 3111 721 157 5364 7163 857 13 40 260 34 1179 2214 2435 2328 2764 2423 2511 2473 2318 2699 2507 2297 2409 2454 2559 2647 2547 2328 2279 2379 2308 2434 2351 ]
G [ 2588 2494 2628 2629 2616 2572 2502 2598 2742 2504 2533 2434 2406 2800 2531 2783 2587 2024 1046 3238 898 238 4030 9945 9117 20 20 2786 1973 3447 2913 2744 2816 2725 2868 2739 2507 2304 2562 2500 2459 2538 2485 2568 2604 2619 2569 2476 2498 2500 ]
T [ 2613 2661 2525 2473 2514 2635 2692 2685 2679 2692 2494 2487 2681 2373 2654 2306 2291 2872 7302 5585 1204 2565 2099 22 912 62 72 2006 4217 2165 2173 2491 2628 2574 2401 2499 2438 2622 2695 2790 2722 2624 2649 2653 2552 2655 2532 2638 2576 2709 ]

Hypothetical CWM

   
A [ -0.01 -0.01 0.01 -0.01 -0.02 -0.01 0.01 -0.05 -0.02 0.00 -0.03 0.07 0.08 0.02 -0.01 -0.01 -0.00 ]
C [ 0.02 0.02 0.01 0.01 -0.03 -0.08 0.05 0.10 0.05 -0.01 -0.04 0.01 -0.02 -0.00 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.00 -0.01 0.02 -0.03 -0.01 0.05 0.10 0.07 -0.08 -0.04 0.01 -0.00 0.02 0.02 ]
T [ -0.00 -0.00 -0.01 0.01 0.06 0.06 -0.02 0.00 -0.02 -0.06 0.02 -0.02 -0.02 -0.00 0.02 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 12878

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 7438

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 310

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 264

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 148

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 113

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 51

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 44

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 26

CWM

PFM

     

HCWM

3 profiles found for the same TF (STAT3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001020.1 STAT3 ENCSR000DOQ MCF 10A Homo sapiens MA0144.3
BP001021.1 STAT3 ENCSR000DOZ MCF 10A Homo sapiens MA0144.3
BP001023.1 STAT3 ENCSR000EDC HeLa-S3 Homo sapiens MA0144.3
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