Detailed information of deep learning profile BP001020.1

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This page shows detailed deep learning-derived predictions and motifs for STAT3 in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: STAT3
Model ID: BP001020.1
Cell line/tissue: MCF 10A
Class: STAT domain factors
Family: STAT factors
JASPAR ID: MA0144.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P40763  
Source: ENCSR000DOQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.04 0.05 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 -0.00 0.00 -0.00 0.00 0.06 0.09 0.04 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.05 0.00 -0.00 0.00 0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 0.07 0.07 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 827 816 762 879 826 727 1000 1050 898 815 784 775 712 797 862 882 706 570 1306 610 15 11 271 4 301 2772 156 2281 2810 1041 663 630 870 702 846 777 732 900 810 802 912 892 735 738 757 880 816 792 818 818 ]
C [ 696 858 820 726 704 722 704 684 700 612 683 776 882 860 808 831 810 1093 637 868 1 0 2806 3018 2451 124 96 708 129 595 746 887 775 887 639 671 806 709 900 816 739 770 795 845 870 751 794 757 763 813 ]
G [ 668 625 645 758 896 871 695 631 643 757 821 754 806 727 732 734 740 802 612 337 1 84 11 3 136 33 2475 15 71 952 516 966 757 780 904 786 814 705 597 565 655 647 684 671 700 663 639 699 696 717 ]
T [ 932 824 896 760 697 803 724 758 882 939 835 818 723 739 721 676 867 658 568 1308 3106 3028 35 98 235 194 396 119 113 535 1198 640 721 754 734 889 771 809 816 940 817 814 909 869 796 829 874 875 846 775 ]

Hypothetical CWM

   
A [ -0.01 -0.00 0.02 -0.00 -0.02 -0.01 0.02 -0.05 -0.01 0.00 -0.01 0.05 0.06 0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.02 -0.00 0.01 -0.04 -0.08 0.07 0.09 0.05 -0.01 -0.03 0.02 -0.01 0.00 0.01 0.01 0.01 ]
G [ 0.02 0.02 0.01 -0.01 -0.03 0.01 -0.04 -0.01 0.05 0.10 0.06 -0.07 -0.03 0.01 0.00 0.02 0.02 ]
T [ -0.00 -0.00 -0.01 0.02 0.07 0.07 -0.02 0.01 -0.02 -0.05 0.01 -0.01 -0.02 -0.01 0.01 -0.00 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 14825

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6061

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5672

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 658

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 559

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 413

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 333

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 176

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 115

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 93

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 43

CWM

PFM

     

HCWM

3 profiles found for the same TF (STAT3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001021.1 STAT3 ENCSR000DOZ MCF 10A Homo sapiens MA0144.3
BP001022.1 STAT3 ENCSR000DPB MCF 10A Homo sapiens MA0144.3
BP001023.1 STAT3 ENCSR000EDC HeLa-S3 Homo sapiens MA0144.3
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