Detailed information of deep learning profile BP000951.1

This page shows detailed deep learning-derived predictions and motifs for E2F4 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F4
Model ID: BP000951.1
Cell line/tissue: WTC11
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA0470.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q16254  
Source: ENCSR264OKN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 0.01 0.00 0.02 -0.00 0.01 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.01 0.01 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

A [ 108 107 107 99 114 114 108 111 116 125 134 119 148 166 102 95 95 162 217 231 98 32 14 8 4 1 1 0 6 240 147 119 116 111 101 141 159 123 108 124 101 94 96 102 102 116 110 113 112 118 ]
C [ 267 232 254 245 264 248 265 249 261 256 217 262 236 212 219 229 269 210 188 128 130 67 15 613 520 703 1 685 442 235 232 269 220 233 270 189 220 249 212 260 276 238 270 263 248 266 255 241 242 252 ]
G [ 220 244 225 226 191 230 185 217 226 205 232 225 203 178 172 149 172 240 190 164 108 21 20 60 170 0 700 16 217 135 121 212 199 199 182 235 192 206 255 189 200 256 233 226 210 209 222 211 224 227 ]
T [ 109 121 118 134 135 112 146 127 101 118 121 98 117 148 211 231 168 92 109 181 368 584 655 23 10 0 2 3 39 94 204 104 169 161 151 139 133 126 129 131 127 116 105 113 144 113 117 139 126 107 ]

Hypothetical CWM

A [ -0.00 -0.00 0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.02 -0.02 -0.01 -0.02 -0.00 -0.00 -0.00 -0.01 ]
C [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 0.01 0.00 0.02 -0.01 0.02 0.00 -0.00 -0.00 0.00 -0.00 ]
G [ 0.00 -0.00 -0.00 -0.00 -0.01 -0.00 -0.00 0.01 -0.01 0.02 -0.01 0.01 -0.00 -0.00 -0.00 -0.00 ]
T [ -0.01 -0.01 -0.00 0.00 0.01 0.01 -0.01 -0.02 -0.02 -0.02 -0.01 -0.01 -0.01 -0.00 -0.01 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 268

6 profiles found for the same TF (E2F4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000947.1 E2F4 ENCSR000DOR MCF 10A Homo sapiens MA0470.3
BP000948.1 E2F4 ENCSR000DYY GM12878 Homo sapiens MA0470.3
BP000949.1 E2F4 ENCSR000EVL HeLa-S3 Homo sapiens MA0470.3
BP000950.1 E2F4 ENCSR000EWL K562 Homo sapiens MA0470.3
BP000952.1 E2F4 ENCSR368GJN K562 Homo sapiens MA0470.3
BP000953.1 E2F4 ENCSR924LSO HepG2 Homo sapiens MA0470.3
Showing 6 profiles of page 1 from 1 pages
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