JASPAR - E2F4 - BP000947.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F4 in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F4
Model ID:	BP000947.1
Cell line/tissue:	MCF 10A
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	MA0470.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q16254
Source:	ENCSR000DOR
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 7175

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.02	0.02	]
C [	0.00	0.00	0.00	0.01	0.00	0.10	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.01	0.01	0.03	0.08	0.00	0.10	0.06	0.04	0.00	0.00	]
T [	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	1515	1557	1533	1511	1489	1540	1515	1563	1468	1503	1485	1399	1422	1535	1614	1521	1401	1697	1061	2059	1666	818	9	19	6	4	122	5343	3792	2084	1807	1453	1354	1632	1674	1627	1465	1557	1480	1513	1530	1463	1563	1547	1560	1589	1559	1530	1457	1421	]
C [	1946	1985	2018	1979	1898	2001	2040	1954	1905	1957	1904	2031	2081	2037	1846	1968	2024	1912	2269	1174	948	1372	601	7151	6	15	371	529	1149	1650	1569	1747	1797	1682	1683	1716	1796	1901	1926	1858	1905	1990	1875	1916	1963	1795	1918	1929	1927	1937	]
G [	2224	2242	2240	2296	2396	2280	2221	2323	2399	2324	2278	2344	2352	2351	2417	2453	2530	2396	2997	2361	2862	4934	6563	1	7162	7146	6441	895	1481	2028	1861	2321	2618	2698	2579	2487	2354	2326	2315	2449	2296	2324	2298	2364	2295	2350	2347	2343	2331	2310	]
T [	1490	1391	1384	1389	1392	1354	1399	1335	1403	1391	1508	1401	1320	1252	1298	1233	1220	1170	848	1581	1699	51	2	4	1	10	241	408	753	1413	1938	1654	1406	1163	1239	1345	1560	1391	1454	1355	1444	1398	1439	1348	1357	1441	1351	1373	1460	1507	]

Hypothetical CWM

A [	0.00	-0.01	0.01	-0.00	-0.00	-0.05	-0.02	-0.05	-0.06	-0.03	0.03	0.02	0.01	0.00	]
C [	0.01	0.02	0.01	0.01	0.04	0.03	0.10	0.00	0.07	0.02	0.01	0.00	0.01	0.00	]
G [	0.01	0.02	0.01	0.02	0.04	0.08	-0.01	0.10	0.06	0.05	0.00	0.01	0.00	-0.00	]
T [	-0.00	-0.01	0.00	0.01	-0.05	-0.06	-0.05	-0.05	-0.05	-0.00	-0.00	0.00	0.01	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2861

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1284

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 648

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 635

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 297

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 178

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 102

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 24

CWM

PFM

HCWM

6 profiles found for the same TF (E2F4) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000948.1	E2F4	ENCSR000DYY	GM12878	Homo sapiens	MA0470.3
BP000949.1	E2F4	ENCSR000EVL	HeLa-S3	Homo sapiens	MA0470.3
BP000950.1	E2F4	ENCSR000EWL	K562	Homo sapiens	MA0470.3
BP000951.1	E2F4	ENCSR264OKN	WTC11	Homo sapiens	MA0470.3
BP000952.1	E2F4	ENCSR368GJN	K562	Homo sapiens	MA0470.3
BP000953.1	E2F4	ENCSR924LSO	HepG2	Homo sapiens	MA0470.3