JASPAR - ZNF143 - BP000944.1

This page shows detailed deep learning-derived predictions and motifs for ZNF143 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF143
Model ID:	BP000944.1
Cell line/tissue:	HepG2
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA0088.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P52747
Source:	ENCSR080UEM
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 7105

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	-0.00	0.01	0.01	-0.00	-0.00	-0.00	0.02	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.04	0.01	0.01	-0.00	0.00	-0.00	0.03	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.03	0.00	0.04	-0.00	-0.00	-0.00	-0.00	0.01	0.00	0.00	0.00	0.02	0.01	0.00	0.00	0.00	-0.00	-0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.01	0.01	0.00	0.00	]
G [	0.01	0.00	-0.00	0.03	-0.00	0.01	0.01	0.01	0.07	0.01	-0.00	-0.00	0.01	-0.00	-0.00	0.12	0.12	0.10	-0.00	0.00	0.00	0.00	0.04	0.00	0.00	0.04	0.00	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.03	0.01	-0.00	0.05	-0.00	-0.00	0.00	0.00	-0.00	0.01	0.02	-0.00	0.03	0.00	-0.00	0.04	0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	1359	1393	1415	1396	1334	1554	1329	1536	1221	1168	1216	1582	1431	971	1102	716	906	2994	2232	1858	169	1095	3671	438	302	1186	59	43	17	130	5546	3488	2683	949	969	1085	3392	954	954	960	1009	1371	1247	1538	1301	1223	1233	1280	1321	1360	]
C [	1974	1950	1993	2228	2350	2116	2275	2144	2402	2532	2199	2009	1753	2596	3871	1756	4811	657	935	284	135	3019	2254	1489	1484	4579	1436	25	32	25	339	886	1238	1227	1126	1211	1218	1250	1166	2624	2565	2085	2072	2002	2038	2126	2158	2021	1983	2023	]
G [	2199	2472	2485	2240	2156	2163	2223	2192	2202	2174	2131	2198	2971	2385	774	4120	644	2648	3256	3478	6573	2640	547	803	2948	811	38	7011	7044	6823	431	2096	1476	1579	4119	1767	1744	4007	1549	1573	1650	1971	2158	2188	2245	2305	2155	2318	2306	2354	]
T [	1573	1290	1212	1241	1265	1272	1278	1233	1280	1231	1559	1316	950	1153	1358	513	744	806	682	1485	228	351	633	4375	2371	529	5572	26	12	127	789	635	1708	3350	891	3042	751	894	3436	1948	1881	1678	1628	1377	1521	1451	1559	1486	1495	1368	]

Hypothetical CWM

A [	-0.01	-0.01	-0.01	-0.01	-0.01	-0.02	-0.01	0.02	0.02	0.00	-0.03	0.01	0.03	-0.02	-0.02	0.03	-0.06	-0.04	-0.05	-0.02	0.05	0.03	0.03	-0.01	0.00	]
C [	0.01	0.01	0.01	0.01	0.05	0.01	0.05	-0.02	0.00	-0.01	-0.02	0.03	0.02	0.03	0.01	0.03	0.08	-0.02	-0.01	-0.06	-0.01	-0.00	-0.00	0.02	-0.01	]
G [	0.01	0.00	0.02	0.01	-0.01	0.05	-0.01	0.04	0.02	0.02	0.07	0.02	-0.01	-0.01	0.03	-0.00	-0.05	0.12	0.12	0.10	-0.02	0.01	0.01	-0.00	0.05	]
T [	-0.00	-0.01	-0.01	-0.01	-0.02	-0.03	-0.02	-0.02	-0.01	0.01	-0.01	-0.02	-0.00	0.05	0.03	-0.01	0.07	-0.05	-0.07	-0.01	0.03	0.00	0.02	0.03	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 755

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 305

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 259

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 103

CWM

PFM

HCWM

7 profiles found for the same TF (ZNF143) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000939.1	ZNF143	ENCSR000DZL	GM12878	Homo sapiens	MA0088.2
BP000940.1	ZNF143	ENCSR000EBW	H1	Homo sapiens	MA0088.2
BP000941.1	ZNF143	ENCSR000ECO	HeLa-S3	Homo sapiens	MA0088.2
BP000942.1	ZNF143	ENCSR000EGP	K562	Homo sapiens	MA0088.2
BP000943.1	ZNF143	ENCSR063FUV	WTC11	Homo sapiens	MA0088.2
BP000945.1	ZNF143	ENCSR427WZJ	K562	Homo sapiens	MA0088.2
BP000946.1	ZNF143	ENCSR936XTK	GM12878	Homo sapiens	MA0088.2