Detailed information of deep learning profile BP000943.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF143 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF143
Model ID: BP000943.1
Cell line/tissue: WTC11
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0088.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P52747  
Source: ENCSR063FUV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.01 0.00 -0.00 0.00 0.00 0.00 -0.00 0.03 -0.00 0.01 0.03 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.00 -0.00 0.06 0.07 0.07 0.00 0.00 0.01 -0.00 -0.00 0.00 0.05 0.00 0.01 0.01 -0.00 0.03 -0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.01 0.01 0.00 0.00 0.00 0.02 -0.00 -0.00 -0.00 -0.00 0.03 0.00 0.03 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.01 0.02 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 512 522 495 473 490 490 563 547 896 380 310 654 369 907 470 239 366 61 14 17 1884 174 992 1841 173 121 30 687 206 185 211 121 338 393 292 498 462 435 446 445 449 485 457 428 469 474 519 452 469 469 ]
C [ 876 865 858 906 883 857 736 767 757 1261 889 918 1267 709 701 825 201 2495 2554 2564 22 423 1117 173 161 821 2535 1133 1368 1247 150 1744 217 1027 1178 805 897 931 875 884 930 812 821 885 912 892 848 830 856 847 ]
G [ 793 817 822 766 787 785 892 961 577 571 598 592 553 580 579 372 154 18 51 33 698 1593 453 520 735 1417 27 127 345 122 1985 565 1736 908 663 808 814 827 849 786 820 800 852 806 744 792 774 795 812 786 ]
T [ 446 423 452 482 467 495 436 352 397 415 830 463 438 431 877 1191 1906 53 8 13 23 437 65 93 1558 268 35 680 708 1073 281 197 336 299 494 516 454 434 457 512 428 530 497 508 502 469 486 550 490 525 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 -0.00 0.02 0.00 -0.04 -0.03 0.04 -0.01 0.02 0.04 -0.01 -0.01 -0.01 0.01 -0.00 -0.02 -0.01 -0.03 -0.01 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.02 0.00 0.01 0.00 -0.01 0.06 0.07 0.07 -0.04 0.01 0.01 -0.01 -0.00 0.01 0.05 0.01 0.01 0.03 -0.01 0.04 -0.02 0.01 0.01 0.00 0.01 ]
G [ 0.00 0.01 0.00 0.00 -0.00 -0.03 0.01 -0.00 0.05 0.02 0.01 0.02 0.01 0.03 -0.01 -0.01 -0.00 -0.02 0.04 0.00 0.04 0.01 0.01 0.01 0.00 ]
T [ -0.00 -0.00 0.02 0.02 0.03 -0.01 -0.04 -0.03 -0.04 0.02 -0.02 -0.02 0.03 -0.01 -0.01 0.01 0.01 0.02 -0.00 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2886

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 210

CWM

PFM

     

HCWM

7 profiles found for the same TF (ZNF143) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000939.1 ZNF143 ENCSR000DZL GM12878 Homo sapiens MA0088.2
BP000940.1 ZNF143 ENCSR000EBW H1 Homo sapiens MA0088.2
BP000941.1 ZNF143 ENCSR000ECO HeLa-S3 Homo sapiens MA0088.2
BP000942.1 ZNF143 ENCSR000EGP K562 Homo sapiens MA0088.2
BP000944.1 ZNF143 ENCSR080UEM HepG2 Homo sapiens MA0088.2
BP000945.1 ZNF143 ENCSR427WZJ K562 Homo sapiens MA0088.2
BP000946.1 ZNF143 ENCSR936XTK GM12878 Homo sapiens MA0088.2
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