JASPAR - ZBTB40 - BP000927.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZBTB40
Model ID:	BP000927.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	UN0146.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NUA8
Source:	ENCSR579YNY
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2649

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.01	0.03	0.07	-0.00	0.11	0.13	0.13	-0.00	-0.00	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.00	]
C [	-0.00	0.00	0.01	-0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]
G [	0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.00	0.00	0.12	-0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	-0.00	]
T [	-0.00	0.02	0.00	-0.00	-0.00	0.08	-0.00	0.00	-0.00	-0.00	0.08	0.14	0.06	0.05	0.00	0.03	0.02	0.00	]

Frequency matrix

A [	814	595	469	455	566	924	532	498	784	460	462	523	459	366	401	302	329	230	732	183	1465	2289	2536	9	2638	2643	2638	7	34	5	123	98	1792	254	251	436	673	1516	1819	453	1772	521	1706	538	537	541	1596	499	988	465	]
C [	456	370	1032	1170	850	457	1072	772	412	1091	1241	355	314	394	301	258	327	228	253	425	621	119	15	33	5	2	6	1	194	1	77	125	157	208	182	143	208	435	206	1508	217	1317	209	331	1280	1295	296	821	316	1188	]
G [	763	1029	503	364	441	688	383	324	791	380	295	309	1236	352	437	332	452	208	1219	85	151	125	51	13	2	2	2	2636	6	6	192	108	238	182	191	1549	1363	261	219	214	262	274	327	1341	257	250	318	294	842	318	]
T [	616	655	645	660	792	580	662	1055	662	718	651	1462	640	1537	1510	1757	1541	1983	445	1956	412	116	47	2594	4	2	3	5	2415	2637	2257	2318	462	2005	2025	521	405	437	405	474	398	537	407	439	575	563	439	1035	503	678	]

Hypothetical CWM

A [	0.01	-0.00	-0.01	0.03	0.07	-0.00	0.11	0.13	0.13	0.02	-0.05	-0.06	-0.01	-0.00	0.02	0.00	0.01	]
C [	0.01	0.04	0.05	0.01	-0.01	-0.00	-0.03	-0.02	0.00	-0.06	0.07	-0.06	-0.03	0.00	-0.00	0.01	0.01	]
G [	0.02	-0.01	0.00	0.02	-0.00	-0.04	-0.03	-0.06	-0.06	0.12	-0.07	-0.02	0.02	-0.01	0.02	0.01	0.00	]
T [	0.01	0.03	0.02	-0.00	-0.00	0.08	-0.03	-0.05	-0.06	-0.04	0.09	0.14	0.06	0.05	0.02	0.04	0.03	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 210

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 125

CWM

PFM

HCWM

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000921.1	ZBTB40	ENCSR158RYZ	K562	Homo sapiens	UN0146.2
BP000922.1	ZBTB40	ENCSR189YYK	GM12878	Homo sapiens	UN0146.2
BP000923.1	ZBTB40	ENCSR200AWS	HepG2	Homo sapiens	UN0146.2
BP000924.1	ZBTB40	ENCSR237VLT	K562	Homo sapiens	UN0146.2
BP000925.1	ZBTB40	ENCSR318LVG	MCF-7	Homo sapiens	UN0146.2
BP000926.1	ZBTB40	ENCSR525YFS	HepG2	Homo sapiens	UN0146.2