JASPAR - ZBTB40 - BP000926.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZBTB40
Model ID:	BP000926.1
Cell line/tissue:	HepG2
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	UN0146.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NUA8
Source:	ENCSR525YFS
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_4

Number of seqlets: 510

Contribution weight matrix (CWM)

A [	0.01	0.00	0.02	0.02	0.08	0.04	0.00	0.00	0.00	-0.00	0.06	-0.00	-0.00	-0.00	0.01	-0.00	0.00	]
C [	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.09	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	-0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.01	0.01	0.00	-0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.07	0.08	0.07	-0.00	0.06	0.03	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	150	139	160	136	126	128	123	120	142	131	159	136	128	134	171	231	234	186	334	323	507	416	0	0	0	1	496	6	28	108	278	129	268	175	205	169	193	143	189	134	144	150	154	156	127	146	154	142	153	156	]
C [	82	119	78	93	95	92	125	89	86	89	76	74	82	118	126	86	78	109	58	105	2	3	507	0	0	2	3	6	42	46	39	129	92	145	143	137	99	128	102	93	108	109	105	107	147	108	109	114	132	96	]
G [	106	71	107	85	112	119	76	87	103	68	114	92	87	87	61	76	90	97	62	38	1	66	1	2	0	0	10	0	35	209	138	96	57	66	56	73	109	109	86	130	130	95	128	116	90	129	118	115	90	104	]
T [	172	181	165	196	177	171	186	214	179	222	161	208	213	171	152	117	108	118	56	44	0	25	2	508	510	507	1	498	405	147	55	156	93	124	106	131	109	130	133	153	128	156	123	131	146	127	129	139	135	154	]

Hypothetical CWM

A [	0.00	0.01	0.01	0.02	0.02	0.08	0.05	-0.03	-0.04	-0.04	-0.03	0.07	-0.03	-0.02	-0.00	0.01	-0.00	0.01	-0.00	-0.00	]
C [	0.01	0.01	0.01	0.00	0.01	-0.01	-0.04	0.09	-0.06	-0.03	-0.03	-0.03	-0.01	0.01	-0.00	-0.00	0.02	0.01	0.02	0.02	]
G [	0.01	0.01	-0.00	0.01	-0.01	-0.04	0.02	-0.02	0.01	-0.03	-0.03	-0.01	-0.00	-0.01	0.03	0.03	0.01	0.01	0.01	0.01	]
T [	-0.01	-0.01	0.00	-0.02	-0.02	-0.04	-0.03	-0.02	0.07	0.08	0.07	-0.03	0.06	0.03	-0.00	-0.02	0.00	-0.01	-0.01	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2808

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1134

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 919

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 651

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 210

CWM

PFM

HCWM

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000921.1	ZBTB40	ENCSR158RYZ	K562	Homo sapiens	UN0146.2
BP000922.1	ZBTB40	ENCSR189YYK	GM12878	Homo sapiens	UN0146.2
BP000923.1	ZBTB40	ENCSR200AWS	HepG2	Homo sapiens	UN0146.2
BP000924.1	ZBTB40	ENCSR237VLT	K562	Homo sapiens	UN0146.2
BP000925.1	ZBTB40	ENCSR318LVG	MCF-7	Homo sapiens	UN0146.2
BP000927.1	ZBTB40	ENCSR579YNY	K562	Homo sapiens	UN0146.2