JASPAR - ZBTB40 - BP000921.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZBTB40
Model ID:	BP000921.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	UN0146.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NUA8
Source:	ENCSR158RYZ
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 4682

Contribution weight matrix (CWM)

A [	-0.00	-0.00	0.00	0.02	0.04	0.00	0.06	0.06	0.11	0.06	0.00	-0.00	0.00	-0.00	0.09	-0.00	-0.00	0.00	0.02	0.00	]
C [	0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.11	0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.00	]
G [	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	]
T [	0.00	0.00	0.00	-0.00	-0.00	0.02	-0.00	0.00	-0.00	-0.00	0.00	0.13	0.12	0.12	0.00	0.08	0.04	-0.00	-0.00	0.00	]

Frequency matrix

A [	1228	875	1802	750	986	1018	785	745	965	721	855	702	769	686	865	3361	3343	775	3792	3758	4520	4024	10	1	2	7	4602	79	196	765	3232	834	3380	2644	2993	2555	2535	1018	2471	1142	1329	1157	1820	1071	1037	1353	1193	1170	1170	1079	]
C [	600	1501	586	660	527	511	2265	629	520	495	442	409	483	2373	2557	392	363	475	269	394	25	37	4627	31	0	6	30	85	285	288	201	2049	427	784	645	802	690	2073	658	611	672	1375	585	695	1197	794	671	859	1700	1309	]
G [	2013	581	1417	566	2262	2178	625	437	2243	442	2539	438	713	397	387	399	453	313	318	205	59	437	10	6	7	8	44	12	207	931	859	532	409	646	450	588	764	635	669	2118	1827	751	1366	1869	806	1451	1986	1763	751	804	]
T [	841	1725	877	2706	907	975	1007	2871	954	3024	846	3133	2717	1226	873	530	523	3119	303	325	78	184	35	4644	4673	4661	6	4506	3994	2698	390	1267	466	608	594	737	693	956	884	811	854	1399	911	1047	1642	1084	832	890	1061	1490	]

Hypothetical CWM

A [	0.01	0.02	0.04	0.00	0.06	0.06	0.11	0.06	-0.01	-0.07	-0.05	-0.03	0.09	-0.02	-0.02	0.02	0.03	0.02	0.03	0.02	0.01	]
C [	0.01	0.01	-0.01	0.02	-0.01	-0.01	-0.04	-0.05	0.11	-0.03	-0.04	-0.05	-0.03	0.00	0.03	0.00	-0.00	0.01	0.02	0.04	0.03	]
G [	0.00	0.02	0.01	-0.01	-0.01	-0.02	-0.02	0.05	-0.03	-0.01	-0.03	-0.03	0.01	-0.03	0.01	0.05	0.04	0.01	0.00	0.01	0.02	]
T [	0.02	-0.00	-0.00	0.03	-0.01	-0.01	-0.04	-0.01	0.01	0.13	0.12	0.12	-0.04	0.08	0.04	0.00	-0.00	0.01	-0.00	-0.01	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4457

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2190

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1723

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 918

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 143

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 96

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 43

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 30

CWM

PFM

HCWM

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000922.1	ZBTB40	ENCSR189YYK	GM12878	Homo sapiens	UN0146.2
BP000923.1	ZBTB40	ENCSR200AWS	HepG2	Homo sapiens	UN0146.2
BP000924.1	ZBTB40	ENCSR237VLT	K562	Homo sapiens	UN0146.2
BP000925.1	ZBTB40	ENCSR318LVG	MCF-7	Homo sapiens	UN0146.2
BP000926.1	ZBTB40	ENCSR525YFS	HepG2	Homo sapiens	UN0146.2
BP000927.1	ZBTB40	ENCSR579YNY	K562	Homo sapiens	UN0146.2