JASPAR - ZBTB40 - BP000924.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZBTB40
Model ID:	BP000924.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	UN0146.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NUA8
Source:	ENCSR237VLT
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 4848

Contribution weight matrix (CWM)

A [	-0.00	0.00	-0.00	-0.00	0.04	0.07	0.00	0.11	0.12	0.11	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	]
C [	-0.00	0.00	0.00	0.01	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	]
G [	0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.00	0.00	0.12	-0.00	-0.00	-0.00	-0.00	0.00	0.00	]
T [	0.01	-0.00	0.01	-0.00	-0.00	-0.00	0.09	0.00	0.00	-0.00	-0.00	0.06	0.08	0.02	0.02	0.00	0.01	]

Frequency matrix

A [	1425	1228	1305	1240	1270	1554	1275	1239	1445	1349	1434	1460	1294	1202	1313	1125	1160	876	1524	652	1629	3897	4680	0	4840	4847	4842	12	285	115	608	579	1639	1047	1170	1391	1587	1873	1848	1573	2124	1696	2082	1595	1531	1603	1954	1557	1673	1500	]
C [	929	914	1075	1109	986	859	1138	1110	884	1204	1200	766	796	916	748	576	643	449	872	1127	1566	254	6	10	5	1	5	5	532	69	412	663	650	820	650	606	651	754	775	1103	639	971	654	705	1142	1096	726	951	843	1040	]
G [	976	1134	1016	1086	981	1076	916	874	979	887	780	874	1286	919	955	1158	1135	794	1222	340	436	425	69	22	1	0	0	4829	28	34	828	533	894	765	752	1210	1135	703	716	746	732	837	807	1170	776	798	888	869	1042	844	]
T [	1518	1572	1452	1413	1611	1359	1519	1625	1540	1408	1434	1748	1472	1811	1832	1989	1910	2729	1230	2729	1217	272	93	4816	2	0	1	2	4003	4630	3000	3073	1665	2216	2276	1641	1475	1518	1509	1426	1353	1344	1305	1378	1399	1351	1280	1471	1290	1464	]

Hypothetical CWM

A [	-0.00	0.01	-0.01	0.00	0.05	0.08	-0.04	0.11	0.12	0.11	-0.01	-0.02	-0.02	-0.00	-0.01	0.01	-0.00	]
C [	0.00	0.02	0.03	0.04	-0.00	-0.02	-0.03	-0.05	-0.04	-0.00	-0.03	0.03	-0.03	-0.01	0.01	0.01	0.01	]
G [	0.02	0.02	-0.00	-0.00	0.02	-0.01	-0.01	-0.05	-0.05	-0.05	0.12	-0.05	-0.03	0.00	0.00	0.01	0.01	]
T [	0.02	-0.00	0.02	0.00	-0.03	-0.02	0.09	-0.03	-0.04	-0.06	-0.03	0.07	0.08	0.03	0.03	0.01	0.02	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 11477

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3041

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 549

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 528

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 306

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 123

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 34

CWM

PFM

HCWM

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000921.1	ZBTB40	ENCSR158RYZ	K562	Homo sapiens	UN0146.2
BP000922.1	ZBTB40	ENCSR189YYK	GM12878	Homo sapiens	UN0146.2
BP000923.1	ZBTB40	ENCSR200AWS	HepG2	Homo sapiens	UN0146.2
BP000925.1	ZBTB40	ENCSR318LVG	MCF-7	Homo sapiens	UN0146.2
BP000926.1	ZBTB40	ENCSR525YFS	HepG2	Homo sapiens	UN0146.2
BP000927.1	ZBTB40	ENCSR579YNY	K562	Homo sapiens	UN0146.2