JASPAR - ZBTB40 - BP000925.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZBTB40
Model ID:	BP000925.1
Cell line/tissue:	MCF-7
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	UN0146.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NUA8
Source:	ENCSR318LVG
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 6452

Contribution weight matrix (CWM)

A [	0.00	0.01	0.02	0.00	0.04	0.05	0.08	0.05	-0.00	-0.00	-0.00	0.00	0.09	-0.00	-0.00	-0.00	0.01	-0.00	]
C [	0.01	0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.12	-0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.01	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.02	-0.00	-0.00	-0.00	-0.00	0.00	0.10	0.11	0.10	-0.00	0.07	0.03	-0.00	-0.00	-0.00	]

Frequency matrix

A [	1728	1303	2432	1239	1496	1492	1258	1148	1478	1143	1327	1106	1219	1138	1381	4396	4403	1202	5135	5090	6203	5528	17	8	1	7	6382	136	343	1230	4411	1319	4422	3408	3954	3318	3343	1546	3216	1736	1939	1780	2469	1679	1559	1967	1778	1703	1753	1613	]
C [	869	1937	806	901	768	745	2869	857	798	730	645	639	672	2955	3214	581	567	718	375	617	46	55	6364	9	3	6	12	185	290	444	303	2573	690	1244	869	1130	928	2568	896	819	949	1729	856	1047	1585	1075	931	1153	2118	1682	]
G [	2552	792	1841	768	2818	2745	850	643	2729	632	3068	664	954	563	494	524	630	493	475	303	57	588	15	20	11	15	47	22	339	1379	1187	709	582	830	614	852	1063	912	938	2589	2276	1012	1789	2199	1040	1819	2439	2154	972	1065	]
T [	1303	2420	1373	3544	1370	1470	1475	3804	1447	3947	1412	4043	3607	1796	1363	951	852	4039	467	442	146	281	56	6415	6437	6424	11	6109	5480	3399	551	1851	758	970	1015	1152	1118	1426	1402	1308	1288	1931	1338	1527	2268	1591	1304	1442	1609	2092	]

Hypothetical CWM

A [	0.00	0.02	0.03	-0.00	0.04	0.05	0.09	0.05	-0.04	-0.06	-0.04	-0.05	0.09	-0.02	-0.02	0.01	0.02	0.01	0.02	0.00	0.01	]
C [	0.01	0.01	-0.00	0.02	-0.00	-0.00	-0.03	-0.04	0.12	-0.04	-0.05	-0.03	-0.04	0.00	0.01	0.00	-0.00	0.02	0.02	0.03	0.02	]
G [	0.01	0.01	0.01	-0.01	0.01	-0.02	-0.03	0.04	-0.03	-0.01	-0.03	-0.02	-0.00	-0.03	0.01	0.04	0.04	0.01	0.00	0.00	0.01	]
T [	0.00	-0.00	-0.01	0.02	-0.02	-0.01	-0.03	-0.03	0.00	0.10	0.11	0.10	-0.04	0.07	0.04	-0.00	-0.01	0.00	-0.00	-0.01	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 8245

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1045

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 641

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 625

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 271

CWM

PFM

HCWM

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000921.1	ZBTB40	ENCSR158RYZ	K562	Homo sapiens	UN0146.2
BP000922.1	ZBTB40	ENCSR189YYK	GM12878	Homo sapiens	UN0146.2
BP000923.1	ZBTB40	ENCSR200AWS	HepG2	Homo sapiens	UN0146.2
BP000924.1	ZBTB40	ENCSR237VLT	K562	Homo sapiens	UN0146.2
BP000926.1	ZBTB40	ENCSR525YFS	HepG2	Homo sapiens	UN0146.2
BP000927.1	ZBTB40	ENCSR579YNY	K562	Homo sapiens	UN0146.2