JASPAR - ZBTB40 - BP000925.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZBTB40
Model ID:	BP000925.1
Cell line/tissue:	MCF-7
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	UN0146.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NUA8
Source:	ENCSR318LVG
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 6452

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	0.03	0.07	-0.00	0.10	0.11	0.10	0.00	-0.00	-0.00	-0.00	-0.00	0.02	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.01	0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	0.12	-0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	0.01	]
T [	-0.00	0.01	-0.00	-0.00	-0.00	0.09	0.00	-0.00	-0.00	-0.00	0.05	0.08	0.05	0.04	0.00	0.02	0.01	0.00	]

Frequency matrix

A [	2092	1609	1442	1304	1591	2268	1527	1338	1931	1288	1308	1402	1426	1118	1152	1015	970	758	1851	551	3399	5480	6109	11	6424	6437	6415	56	281	146	442	467	4039	852	951	1363	1796	3607	4043	1412	3947	1447	3804	1475	1470	1370	3544	1373	2420	1303	]
C [	1065	972	2154	2439	1819	1040	2199	1789	1012	2276	2589	938	912	1063	852	614	830	582	709	1187	1379	339	22	47	15	11	20	15	588	57	303	475	493	630	524	494	563	954	664	3068	632	2729	643	850	2745	2818	768	1841	792	2552	]
G [	1682	2118	1153	931	1075	1585	1047	856	1729	949	819	896	2568	928	1130	869	1244	690	2573	303	444	290	185	12	6	3	9	6364	55	46	617	375	718	567	581	3214	2955	672	639	645	730	798	857	2869	745	768	901	806	1937	869	]
T [	1613	1753	1703	1778	1967	1559	1679	2469	1780	1939	1736	3216	1546	3343	3318	3954	3408	4422	1319	4411	1230	343	136	6382	7	1	8	17	5528	6203	5090	5135	1202	4403	4396	1381	1138	1219	1106	1327	1143	1478	1148	1258	1492	1496	1239	2432	1303	1728	]

Hypothetical CWM

A [	-0.00	-0.01	-0.00	0.00	-0.01	-0.00	0.04	0.07	-0.04	0.10	0.11	0.10	0.00	-0.03	-0.03	-0.01	-0.02	0.02	-0.01	-0.00	0.00	]
C [	0.01	0.00	0.00	0.01	0.04	0.04	0.01	-0.03	-0.00	-0.02	-0.03	-0.01	-0.03	0.04	-0.03	-0.02	0.01	-0.01	0.01	0.01	0.01	]
G [	0.02	0.03	0.02	0.02	-0.00	0.00	0.01	0.00	-0.04	-0.03	-0.05	-0.04	0.12	-0.04	-0.03	-0.00	-0.00	0.02	-0.00	0.01	0.01	]
T [	0.01	0.00	0.02	0.01	0.02	0.01	-0.02	-0.02	0.09	-0.05	-0.04	-0.06	-0.04	0.05	0.09	0.05	0.04	-0.00	0.03	0.02	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 8245

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1045

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 641

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 625

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 271

CWM

PFM

HCWM

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000921.1	ZBTB40	ENCSR158RYZ	K562	Homo sapiens	UN0146.2
BP000922.1	ZBTB40	ENCSR189YYK	GM12878	Homo sapiens	UN0146.2
BP000923.1	ZBTB40	ENCSR200AWS	HepG2	Homo sapiens	UN0146.2
BP000924.1	ZBTB40	ENCSR237VLT	K562	Homo sapiens	UN0146.2
BP000926.1	ZBTB40	ENCSR525YFS	HepG2	Homo sapiens	UN0146.2
BP000927.1	ZBTB40	ENCSR579YNY	K562	Homo sapiens	UN0146.2