JASPAR - ZBTB40 - BP000923.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZBTB40
Model ID:	BP000923.1
Cell line/tissue:	HepG2
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	UN0146.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NUA8
Source:	ENCSR200AWS
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2432

Contribution weight matrix (CWM)

A [	-0.00	-0.00	0.00	0.02	0.04	0.00	0.05	0.07	0.09	0.05	-0.00	0.00	0.00	-0.00	0.07	-0.00	-0.00	-0.00	0.02	-0.00	]
C [	-0.00	0.01	0.01	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.09	-0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	-0.00	0.02	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.01	0.00	]
T [	-0.00	0.00	-0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	-0.00	0.00	0.10	0.12	0.12	0.00	0.08	0.03	-0.00	-0.00	-0.00	]

Frequency matrix

A [	526	386	915	356	466	443	296	293	424	277	352	272	326	279	339	1827	1831	317	1936	1979	2258	2012	16	6	3	3	2380	25	75	266	1745	334	1800	1442	1623	1412	1291	425	1345	544	611	507	932	490	455	663	560	493	500	482	]
C [	347	855	310	381	259	299	1344	354	255	263	228	226	235	1398	1529	194	151	221	159	177	50	26	2384	1	0	5	6	50	139	197	84	1258	229	466	331	427	387	1189	328	320	345	829	315	382	680	407	317	492	1032	788	]
G [	1188	333	810	295	1312	1275	329	234	1298	262	1474	232	434	204	142	178	224	169	152	146	51	259	6	3	4	1	34	4	74	467	468	204	189	288	242	287	439	393	371	1232	1101	400	770	1081	491	890	1190	1080	410	455	]
T [	371	858	397	1400	395	415	463	1551	455	1630	378	1702	1437	551	422	233	226	1725	185	130	73	135	26	2422	2425	2423	12	2353	2144	1502	135	636	214	236	236	306	315	425	388	336	375	696	415	479	806	472	365	367	490	707	]

Hypothetical CWM

A [	-0.02	-0.01	-0.01	0.01	-0.01	0.02	0.03	0.04	0.02	0.05	0.08	0.09	0.06	-0.01	-0.02	-0.03	-0.03	0.07	-0.00	-0.01	0.01	0.02	0.01	0.02	0.00	0.00	0.00	0.00	0.00	0.00	-0.01	-0.01	]
C [	0.02	-0.00	0.01	0.00	0.02	0.02	0.02	0.00	0.03	0.01	0.01	0.01	-0.05	0.09	-0.05	-0.03	-0.03	-0.04	0.01	0.02	0.00	-0.01	0.03	0.02	0.06	0.04	0.04	0.03	0.02	0.01	0.02	0.01	]
G [	0.02	0.03	0.02	0.04	0.02	0.01	0.03	0.01	-0.00	-0.01	-0.01	-0.03	0.05	-0.04	-0.00	-0.02	-0.01	0.04	-0.01	0.03	0.06	0.06	0.01	0.01	-0.00	0.02	0.02	0.02	0.02	0.01	0.01	0.01	]
T [	0.01	0.01	0.02	0.00	0.02	0.01	-0.01	0.00	0.02	0.00	-0.02	-0.02	-0.01	0.02	0.10	0.12	0.12	-0.01	0.08	0.04	0.00	-0.01	0.00	-0.01	-0.02	-0.02	-0.02	-0.02	-0.02	-0.01	-0.01	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 994

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 937

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 299

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 281

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 137

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 131

CWM

PFM

HCWM

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000921.1	ZBTB40	ENCSR158RYZ	K562	Homo sapiens	UN0146.2
BP000922.1	ZBTB40	ENCSR189YYK	GM12878	Homo sapiens	UN0146.2
BP000924.1	ZBTB40	ENCSR237VLT	K562	Homo sapiens	UN0146.2
BP000925.1	ZBTB40	ENCSR318LVG	MCF-7	Homo sapiens	UN0146.2
BP000926.1	ZBTB40	ENCSR525YFS	HepG2	Homo sapiens	UN0146.2
BP000927.1	ZBTB40	ENCSR579YNY	K562	Homo sapiens	UN0146.2