JASPAR - ZBTB40 - BP000922.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZBTB40
Model ID:	BP000922.1
Cell line/tissue:	GM12878
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	UN0146.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NUA8
Source:	ENCSR189YYK
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 4905

Contribution weight matrix (CWM)

A [	-0.00	0.01	0.02	-0.00	0.04	0.04	0.08	0.04	-0.00	-0.00	-0.00	-0.00	0.08	-0.00	-0.00	0.00	0.01	-0.00	0.01	]
C [	0.00	-0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.10	-0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	]
G [	0.00	0.00	-0.00	0.00	0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	0.00	-0.00	-0.00	]
T [	0.00	-0.00	-0.00	0.02	-0.00	-0.00	-0.00	-0.00	-0.00	0.09	0.09	0.09	-0.00	0.05	0.03	-0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	1370	1057	1777	989	1182	1187	986	944	1186	951	1089	983	1117	948	1122	3156	3202	1043	3781	3688	4707	4157	4	1	5	7	4835	151	295	982	3281	1014	3270	2494	2783	2451	2476	1251	2296	1284	1469	1375	1814	1357	1226	1522	1309	1317	1397	1313	]
C [	665	1369	659	665	586	597	2035	680	625	548	485	490	488	2064	2218	509	466	581	326	484	31	34	4882	6	2	11	27	134	252	385	221	1872	534	900	771	815	693	1833	735	645	741	1261	713	759	1171	830	789	919	1560	1218	]
G [	1765	643	1300	616	1968	1932	663	506	1881	502	2155	519	705	401	430	418	497	434	417	261	86	445	2	8	9	7	29	21	234	1114	927	602	462	712	492	638	765	689	700	1881	1605	766	1303	1642	816	1314	1751	1553	729	824	]
T [	1105	1836	1169	2635	1169	1189	1221	2775	1213	2904	1176	2913	2595	1492	1135	822	740	2847	381	472	81	269	17	4890	4889	4880	14	4599	4124	2424	476	1417	639	799	859	1001	971	1132	1174	1095	1090	1503	1075	1147	1692	1239	1056	1116	1219	1550	]

Hypothetical CWM

A [	0.00	0.02	0.02	-0.00	0.04	0.04	0.08	0.05	-0.03	-0.05	-0.03	-0.03	0.08	-0.01	-0.01	0.01	0.01	0.00	0.02	0.00	0.00	]
C [	0.01	-0.00	0.01	0.00	-0.02	-0.00	-0.02	-0.04	0.10	-0.04	-0.02	-0.02	-0.02	-0.00	0.01	0.00	-0.01	0.01	0.01	0.03	0.02	]
G [	0.01	0.01	-0.00	-0.00	0.00	-0.00	-0.04	0.04	-0.03	-0.00	-0.02	-0.03	-0.02	-0.01	0.00	0.03	0.03	0.01	-0.00	0.00	0.01	]
T [	0.01	-0.00	-0.00	0.02	-0.01	-0.01	-0.02	-0.02	0.00	0.09	0.09	0.09	-0.03	0.05	0.03	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 10725

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 728

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 474

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 250

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 242

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 230

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 222

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 20

CWM

PFM

HCWM

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000921.1	ZBTB40	ENCSR158RYZ	K562	Homo sapiens	UN0146.2
BP000923.1	ZBTB40	ENCSR200AWS	HepG2	Homo sapiens	UN0146.2
BP000924.1	ZBTB40	ENCSR237VLT	K562	Homo sapiens	UN0146.2
BP000925.1	ZBTB40	ENCSR318LVG	MCF-7	Homo sapiens	UN0146.2
BP000926.1	ZBTB40	ENCSR525YFS	HepG2	Homo sapiens	UN0146.2
BP000927.1	ZBTB40	ENCSR579YNY	K562	Homo sapiens	UN0146.2