JASPAR - ZBTB40 - BP000922.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZBTB40
Model ID:	BP000922.1
Cell line/tissue:	GM12878
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	UN0146.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NUA8
Source:	ENCSR189YYK
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 4905

Contribution weight matrix (CWM)

A [	-0.00	0.00	-0.00	-0.00	0.03	0.05	-0.00	0.09	0.09	0.09	-0.00	-0.00	-0.00	-0.00	-0.00	0.02	-0.00	-0.00	0.00	]
C [	-0.00	-0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	]
G [	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	0.10	-0.00	-0.00	-0.00	-0.00	0.00	0.00	-0.00	0.00	]
T [	0.01	-0.00	0.01	0.00	-0.00	-0.00	0.08	-0.00	-0.00	-0.00	-0.00	0.04	0.08	0.04	0.04	-0.00	0.02	0.01	-0.00	]

Frequency matrix

A [	1550	1219	1116	1056	1239	1692	1147	1075	1503	1090	1095	1174	1132	971	1001	859	799	639	1417	476	2424	4124	4599	14	4880	4889	4890	17	269	81	472	381	2847	740	822	1135	1492	2595	2913	1176	2904	1213	2775	1221	1189	1169	2635	1169	1836	1105	]
C [	824	729	1553	1751	1314	816	1642	1303	766	1605	1881	700	689	765	638	492	712	462	602	927	1114	234	21	29	7	9	8	2	445	86	261	417	434	497	418	430	401	705	519	2155	502	1881	506	663	1932	1968	616	1300	643	1765	]
G [	1218	1560	919	789	830	1171	759	713	1261	741	645	735	1833	693	815	771	900	534	1872	221	385	252	134	27	11	2	6	4882	34	31	484	326	581	466	509	2218	2064	488	490	485	548	625	680	2035	597	586	665	659	1369	665	]
T [	1313	1397	1317	1309	1522	1226	1357	1814	1375	1469	1284	2296	1251	2476	2451	2783	2494	3270	1014	3281	982	295	151	4835	7	5	1	4	4157	4707	3688	3781	1043	3202	3156	1122	948	1117	983	1089	951	1186	944	986	1187	1182	989	1777	1057	1370	]

Hypothetical CWM

A [	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.03	0.05	-0.03	0.09	0.09	0.09	0.00	-0.02	-0.02	-0.01	-0.01	0.02	-0.00	-0.00	0.01	]
C [	0.01	0.00	-0.00	0.01	0.03	0.03	0.00	-0.01	-0.02	-0.03	-0.02	-0.00	-0.03	0.04	-0.04	-0.00	0.00	-0.00	-0.00	0.01	0.01	]
G [	0.02	0.03	0.01	0.01	-0.01	0.00	0.01	-0.00	-0.02	-0.02	-0.02	-0.04	0.10	-0.04	-0.02	-0.00	-0.02	0.00	0.01	-0.00	0.01	]
T [	0.00	0.00	0.02	0.00	0.01	0.01	-0.01	-0.01	0.08	-0.03	-0.03	-0.05	-0.03	0.05	0.08	0.04	0.04	-0.00	0.02	0.02	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 10725

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 728

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 474

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 250

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 242

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 230

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 222

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 20

CWM

PFM

HCWM

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000921.1	ZBTB40	ENCSR158RYZ	K562	Homo sapiens	UN0146.2
BP000923.1	ZBTB40	ENCSR200AWS	HepG2	Homo sapiens	UN0146.2
BP000924.1	ZBTB40	ENCSR237VLT	K562	Homo sapiens	UN0146.2
BP000925.1	ZBTB40	ENCSR318LVG	MCF-7	Homo sapiens	UN0146.2
BP000926.1	ZBTB40	ENCSR525YFS	HepG2	Homo sapiens	UN0146.2
BP000927.1	ZBTB40	ENCSR579YNY	K562	Homo sapiens	UN0146.2