Detailed information of deep learning profile BP000861.1

This page shows detailed deep learning-derived predictions and motifs for ZNF274 in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF274
Model ID: BP000861.1
Cell line/tissue: HCT116
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1592.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96GC6  
Source: ENCSR101FJM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 -0.00 0.01 0.00 -0.00 0.02 0.00 -0.00 0.05 -0.00 0.00 0.00 0.00 0.00 0.00 0.01 -0.00 0.01 -0.00 ]
C [ -0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.07 0.00 0.06 -0.00 0.01 -0.00 0.00 ]
G [ 0.00 -0.00 0.00 -0.00 0.02 -0.00 0.01 -0.00 0.06 -0.00 0.05 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.02 0.00 -0.00 0.00 0.02 0.02 0.00 0.05 -0.00 0.00 0.00 -0.00 0.00 ]

Frequency matrix

A [ 64 72 199 79 231 93 56 65 61 73 80 44 55 64 52 72 55 231 45 17 216 1 1 383 10 5 2 0 0 0 149 47 230 43 56 57 103 39 168 132 70 141 240 73 92 55 116 102 81 211 ]
C [ 53 139 50 57 49 44 36 43 83 52 29 181 49 213 57 213 289 17 12 23 1 0 0 0 1 0 75 390 0 377 20 114 20 53 23 70 81 110 65 75 71 54 58 50 41 71 64 39 45 45 ]
G [ 58 50 89 32 30 142 211 229 52 30 46 28 36 56 87 47 21 30 326 7 166 16 389 3 379 1 0 0 0 0 2 141 69 17 224 53 35 93 47 99 48 104 23 207 150 86 90 58 199 38 ]
T [ 215 129 52 222 80 111 87 53 194 235 235 137 250 57 194 58 25 112 7 343 7 373 0 4 0 384 313 0 390 13 219 88 71 277 87 210 171 148 110 84 201 91 69 60 107 178 120 191 65 96 ]

Hypothetical CWM

A [ 0.00 0.00 0.00 0.01 0.01 -0.01 0.03 -0.00 -0.00 0.05 0.00 0.00 -0.00 -0.03 -0.02 -0.03 0.02 -0.02 0.02 -0.01 0.01 -0.01 -0.00 ]
C [ -0.00 0.00 0.02 -0.01 -0.01 -0.01 -0.02 -0.03 -0.03 -0.04 -0.01 -0.04 0.00 0.07 -0.02 0.06 -0.02 0.02 -0.02 0.01 -0.01 0.00 -0.00 ]
G [ 0.00 -0.00 0.00 -0.00 0.03 -0.02 0.02 -0.01 0.06 -0.02 0.05 -0.02 -0.05 -0.03 -0.05 -0.02 -0.02 -0.00 -0.00 0.00 -0.00 0.00 -0.00 ]
T [ -0.00 -0.00 -0.01 -0.00 -0.01 0.03 -0.03 0.03 -0.03 -0.02 -0.03 0.02 0.02 -0.01 0.05 -0.00 0.00 0.01 -0.01 0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 340

5 profiles found for the same TF (ZNF274) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000857.1 ZNF274 ENCSR000EUI GM08714 Homo sapiens MA1592.2
BP000858.1 ZNF274 ENCSR000EUN H1 Homo sapiens MA1592.2
BP000859.1 ZNF274 ENCSR000EVX K562 Homo sapiens MA1592.2
BP000860.1 ZNF274 ENCSR000EWY NT2/D1 Homo sapiens MA1592.2
BP000862.1 ZNF274 ENCSR178QVJ HEK293 Homo sapiens MA1592.2
Showing 5 profiles of page 1 from 1 pages
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