JASPAR - ZNF274 - BP000859.1

This page shows detailed deep learning-derived predictions and motifs for ZNF274 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF274
Model ID:	BP000859.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1592.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q96GC6
Source:	ENCSR000EVX
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 1426

Contribution weight matrix (CWM)

A [	0.01	-0.00	-0.00	0.01	-0.00	0.07	-0.00	0.03	0.03	-0.00	-0.00	0.00	0.03	-0.00	0.03	-0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.05	-0.00	0.08	-0.00	0.00	-0.00	0.04	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	-0.00	0.08	-0.00	0.11	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.03	0.01	-0.00	]
T [	-0.00	0.01	-0.00	0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.08	-0.00	0.00	0.03	-0.00	0.00	0.02	0.00	0.00	0.00	]

Frequency matrix

A [	301	174	864	473	612	281	129	121	221	841	259	316	623	614	830	160	1186	137	474	1032	203	1407	7	1175	1336	20	31	0	1337	31	1267	40	249	94	132	894	141	1138	333	1116	1087	963	123	126	244	139	1023	133	686	951	]
C [	92	897	143	321	436	671	928	79	278	205	514	160	334	185	156	1075	60	183	546	19	17	7	3	3	31	715	45	1409	57	416	40	1218	86	44	109	141	100	93	71	95	80	110	1070	1028	720	104	88	509	143	174	]
G [	157	184	114	242	187	125	134	97	131	237	232	157	331	265	236	66	81	56	298	93	1199	5	1397	211	18	61	11	12	5	18	70	56	59	1190	1041	156	1061	85	909	86	147	238	87	102	114	98	143	91	476	123	]
T [	876	171	305	390	191	349	235	1129	796	143	421	793	138	362	204	125	99	1050	108	282	7	7	19	37	41	630	1339	5	27	961	49	112	1032	98	144	235	124	110	113	129	112	115	146	170	348	1085	172	693	121	178	]

Hypothetical CWM

A [	0.01	-0.01	0.00	0.01	-0.01	0.07	-0.03	0.03	0.03	-0.06	-0.03	-0.04	0.03	-0.04	0.04	-0.02	-0.01	-0.02	-0.01	-0.00	-0.00	0.01	]
C [	0.00	0.00	0.01	-0.01	-0.01	-0.06	-0.03	-0.05	-0.01	0.08	-0.02	0.09	0.00	0.03	-0.01	0.05	0.01	0.00	0.01	0.01	0.01	-0.01	]
G [	0.01	0.01	0.03	-0.01	0.09	-0.01	0.11	0.02	-0.03	0.02	-0.04	-0.01	-0.04	-0.02	-0.00	-0.02	0.00	0.04	0.01	-0.00	0.01	-0.00	]
T [	-0.02	0.02	-0.01	0.02	-0.05	-0.04	-0.03	-0.01	-0.00	-0.01	0.08	-0.01	-0.01	0.05	-0.02	0.01	0.02	0.00	0.01	0.01	-0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 329

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 29

CWM

PFM

HCWM

5 profiles found for the same TF (ZNF274) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000857.1	ZNF274	ENCSR000EUI	GM08714	Homo sapiens	MA1592.2
BP000858.1	ZNF274	ENCSR000EUN	H1	Homo sapiens	MA1592.2
BP000860.1	ZNF274	ENCSR000EWY	NT2/D1	Homo sapiens	MA1592.2
BP000861.1	ZNF274	ENCSR101FJM	HCT116	Homo sapiens	MA1592.2
BP000862.1	ZNF274	ENCSR178QVJ	HEK293	Homo sapiens	MA1592.2