Detailed information of deep learning profile BP000861.1

This page shows detailed deep learning-derived predictions and motifs for ZNF274 in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF274
Model ID: BP000861.1
Cell line/tissue: HCT116
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1592.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96GC6  
Source: ENCSR101FJM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 -0.00 0.00 0.00 -0.00 0.05 0.00 0.02 0.02 0.00 -0.00 0.00 0.02 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.05 -0.00 0.06 -0.00 0.01 -0.00 0.02 -0.00 0.00 -0.00 0.00 ]
G [ 0.00 -0.00 0.01 -0.00 0.06 0.00 0.07 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.00 -0.00 ]
T [ -0.00 0.01 -0.00 0.01 0.00 0.00 0.00 0.00 0.00 -0.00 0.05 -0.00 0.00 0.02 -0.00 0.00 0.01 -0.00 0.00 0.00 ]

Frequency matrix

A [ 96 65 191 120 178 107 60 69 91 201 84 110 148 171 210 87 277 71 88 219 13 390 0 313 384 0 4 0 373 7 343 7 112 25 58 194 57 250 137 235 235 194 53 87 111 80 222 52 129 215 ]
C [ 38 199 58 90 86 150 207 23 104 48 99 47 93 35 53 224 17 69 141 2 0 0 0 0 1 379 3 389 16 166 7 326 30 21 47 87 56 36 28 46 30 52 229 211 142 30 32 89 50 58 ]
G [ 45 45 39 64 71 41 50 58 54 71 75 65 110 81 70 23 53 20 114 20 377 0 390 75 0 1 0 0 0 1 23 12 17 289 213 57 213 49 181 29 52 83 43 36 44 49 57 50 139 53 ]
T [ 211 81 102 116 55 92 73 240 141 70 132 168 39 103 57 56 43 230 47 149 0 0 0 2 5 10 383 1 1 216 17 45 231 55 72 52 64 55 44 80 73 61 65 56 93 231 79 199 72 64 ]

Hypothetical CWM

A [ 0.00 0.00 -0.00 0.00 -0.01 0.01 0.00 -0.00 0.05 -0.01 0.02 0.02 -0.03 -0.02 -0.03 0.03 -0.03 0.03 -0.01 -0.00 -0.01 -0.00 -0.00 ]
C [ -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.02 -0.02 -0.05 -0.03 -0.05 -0.02 0.05 -0.02 0.06 -0.01 0.02 -0.02 0.03 -0.00 0.00 -0.00 0.00 ]
G [ -0.00 0.00 -0.01 0.01 -0.02 0.02 -0.02 0.06 -0.02 0.07 0.00 -0.04 -0.01 -0.04 -0.03 -0.03 -0.02 -0.01 -0.01 -0.01 0.02 0.00 -0.00 ]
T [ -0.00 -0.01 0.01 -0.01 0.02 -0.02 0.02 -0.03 -0.02 -0.03 -0.00 0.00 0.00 0.05 -0.00 -0.00 0.03 -0.01 0.01 0.01 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 340

5 profiles found for the same TF (ZNF274) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000857.1 ZNF274 ENCSR000EUI GM08714 Homo sapiens MA1592.2
BP000858.1 ZNF274 ENCSR000EUN H1 Homo sapiens MA1592.2
BP000859.1 ZNF274 ENCSR000EVX K562 Homo sapiens MA1592.2
BP000860.1 ZNF274 ENCSR000EWY NT2/D1 Homo sapiens MA1592.2
BP000862.1 ZNF274 ENCSR178QVJ HEK293 Homo sapiens MA1592.2
Showing 5 profiles of page 1 from 1 pages
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