JASPAR - ZNF274 - BP000858.1

This page shows detailed deep learning-derived predictions and motifs for ZNF274 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF274
Model ID:	BP000858.1
Cell line/tissue:	H1
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1592.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q96GC6
Source:	ENCSR000EUN
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 811

Contribution weight matrix (CWM)

A [	0.00	-0.00	0.00	0.01	-0.00	0.06	0.00	0.02	0.03	-0.00	-0.00	0.00	0.03	-0.00	0.03	-0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	-0.00	-0.00	0.08	-0.00	0.09	-0.00	0.01	-0.00	0.03	-0.00	0.00	0.00	0.00	]
G [	0.00	-0.00	0.01	-0.00	0.07	-0.00	0.11	0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	0.02	-0.00	-0.00	]
T [	-0.00	0.02	-0.00	0.01	-0.00	0.00	0.00	0.00	0.00	-0.00	0.07	-0.00	0.00	0.02	-0.00	0.00	0.01	-0.00	0.00	0.00	]

Frequency matrix

A [	251	162	347	272	319	228	127	140	226	341	212	294	328	335	418	174	559	142	157	493	168	809	0	633	781	1	18	0	766	28	693	23	245	76	102	440	112	487	253	482	487	425	128	176	217	155	478	111	246	433	]
C [	91	316	120	144	229	301	384	96	172	197	200	109	166	89	105	472	41	126	242	11	3	0	0	2	5	808	21	810	41	414	14	666	51	56	121	157	101	93	81	89	61	108	470	433	314	89	77	175	117	129	]
G [	117	151	88	127	132	100	110	99	94	131	179	110	216	144	136	63	100	53	303	57	638	2	811	168	7	1	0	0	0	0	42	31	44	568	425	95	431	99	384	74	107	151	102	90	119	102	111	98	320	99	]
T [	352	182	256	268	131	182	190	476	319	142	220	298	101	243	152	102	111	490	109	250	2	0	0	8	18	1	772	1	4	369	62	91	471	111	163	119	167	132	93	166	156	127	111	112	161	465	145	427	128	150	]

Hypothetical CWM

A [	-0.00	0.01	-0.02	0.00	0.01	-0.01	0.06	-0.03	0.02	0.03	-0.05	-0.02	-0.04	0.03	-0.03	0.04	-0.02	-0.00	-0.02	-0.01	-0.00	]
C [	0.00	-0.00	-0.01	-0.01	-0.04	-0.03	-0.08	-0.04	-0.05	-0.02	0.08	-0.02	0.09	-0.01	0.01	-0.02	0.03	-0.01	0.00	0.00	-0.00	]
G [	-0.01	0.01	-0.01	0.02	-0.01	0.08	-0.01	0.11	0.02	-0.04	-0.00	-0.06	-0.04	-0.04	-0.02	-0.02	-0.02	-0.00	0.03	-0.00	-0.00	]
T [	0.00	-0.02	0.03	-0.01	0.02	-0.04	-0.03	-0.04	-0.01	-0.00	-0.02	0.07	-0.01	-0.01	0.04	-0.02	0.01	0.01	-0.00	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 685

CWM

PFM

HCWM

5 profiles found for the same TF (ZNF274) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000857.1	ZNF274	ENCSR000EUI	GM08714	Homo sapiens	MA1592.2
BP000859.1	ZNF274	ENCSR000EVX	K562	Homo sapiens	MA1592.2
BP000860.1	ZNF274	ENCSR000EWY	NT2/D1	Homo sapiens	MA1592.2
BP000861.1	ZNF274	ENCSR101FJM	HCT116	Homo sapiens	MA1592.2
BP000862.1	ZNF274	ENCSR178QVJ	HEK293	Homo sapiens	MA1592.2