Detailed information of deep learning profile BP000860.1

This page shows detailed deep learning-derived predictions and motifs for ZNF274 in NT2/D1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF274
Model ID: BP000860.1
Cell line/tissue: NT2/D1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1592.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96GC6  
Source: ENCSR000EWY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 0.00 -0.00 0.01 0.00 -0.00 0.02 -0.00 -0.00 0.09 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.01 -0.00 ]
C [ -0.00 0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.11 0.00 0.08 -0.00 0.01 -0.00 0.00 ]
G [ 0.01 0.00 -0.00 0.00 0.03 -0.00 0.01 -0.00 0.10 -0.00 0.08 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.03 -0.00 0.03 0.00 -0.00 -0.00 0.05 0.02 -0.00 0.08 -0.00 0.00 0.00 -0.00 0.00 ]

Frequency matrix

A [ 196 133 422 197 471 206 157 154 139 133 173 150 150 162 143 199 138 478 175 93 438 11 1 919 3 13 6 2 3 4 403 89 477 211 122 212 239 146 311 252 148 335 512 221 215 147 264 276 223 380 ]
C [ 151 324 154 165 149 140 130 165 197 180 126 412 119 440 120 428 632 73 51 93 14 1 2 1 0 2 183 947 0 783 65 397 92 128 112 161 184 255 164 232 193 173 147 134 150 190 159 114 169 127 ]
G [ 130 190 202 111 144 334 461 456 162 121 149 105 168 173 234 164 99 121 688 62 458 76 952 15 951 9 1 3 2 5 44 275 166 77 477 182 133 179 172 257 238 202 132 432 337 248 179 193 383 138 ]
T [ 478 308 177 482 191 275 207 180 457 521 507 288 518 180 458 164 86 283 41 707 45 867 0 20 1 931 765 3 950 163 443 194 220 539 244 400 399 375 308 214 376 245 164 168 253 370 353 372 180 310 ]

Hypothetical CWM

A [ -0.00 0.01 -0.00 0.02 0.01 -0.02 0.04 -0.01 -0.01 0.09 -0.01 -0.01 0.01 -0.04 -0.03 -0.05 0.02 -0.02 0.02 -0.01 ]
C [ -0.00 -0.00 0.03 -0.01 -0.01 -0.00 -0.02 -0.03 -0.04 -0.06 -0.00 -0.05 0.02 0.11 -0.02 0.09 -0.01 0.02 -0.01 0.02 ]
G [ 0.02 0.01 0.00 0.00 0.04 -0.01 0.02 -0.00 0.10 -0.03 0.08 -0.02 -0.06 -0.04 -0.07 -0.03 -0.01 -0.00 -0.00 0.00 ]
T [ -0.00 -0.01 -0.02 -0.01 -0.03 0.04 -0.03 0.03 -0.04 -0.03 -0.06 0.05 0.02 -0.02 0.08 -0.01 0.00 0.01 -0.01 0.01 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 632

5 profiles found for the same TF (ZNF274) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000857.1 ZNF274 ENCSR000EUI GM08714 Homo sapiens MA1592.2
BP000858.1 ZNF274 ENCSR000EUN H1 Homo sapiens MA1592.2
BP000859.1 ZNF274 ENCSR000EVX K562 Homo sapiens MA1592.2
BP000861.1 ZNF274 ENCSR101FJM HCT116 Homo sapiens MA1592.2
BP000862.1 ZNF274 ENCSR178QVJ HEK293 Homo sapiens MA1592.2
Showing 5 profiles of page 1 from 1 pages
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