JASPAR - ZNF274 - BP000859.1

This page shows detailed deep learning-derived predictions and motifs for ZNF274 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF274
Model ID:	BP000859.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1592.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q96GC6
Source:	ENCSR000EVX
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 1426

Contribution weight matrix (CWM)

A [	0.00	0.00	0.00	0.02	0.00	-0.00	0.03	0.00	-0.00	0.08	-0.00	0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	0.01	-0.00	]
C [	-0.00	0.01	0.03	-0.00	-0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.11	-0.00	0.08	-0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.04	-0.00	0.00	-0.00	0.08	-0.00	0.05	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	-0.00	0.03	-0.00	0.03	0.00	-0.00	-0.00	0.03	0.03	-0.00	0.07	-0.00	0.01	-0.00	-0.00	0.01	]

Frequency matrix

A [	178	121	693	172	1085	348	170	146	115	112	129	113	110	124	235	144	98	1032	112	49	961	27	5	1339	630	41	37	19	7	7	282	108	1050	99	125	204	362	138	793	421	143	796	1129	235	349	191	390	305	171	876	]
C [	123	476	91	143	98	114	102	87	238	147	86	909	85	1061	156	1041	1190	59	56	70	18	5	12	11	61	18	211	1397	5	1199	93	298	56	81	66	236	265	331	157	232	237	131	97	134	125	187	242	114	184	157	]
G [	174	143	509	88	104	720	1028	1070	110	80	95	71	93	100	141	109	44	86	1218	40	416	57	1409	45	715	31	3	3	7	17	19	546	183	60	1075	156	185	334	160	514	205	278	79	928	671	436	321	143	897	92	]
T [	951	686	133	1023	139	244	126	123	963	1087	1116	333	1138	141	894	132	94	249	40	1267	31	1337	0	31	20	1336	1175	7	1407	203	1032	474	137	1186	160	830	614	623	316	259	841	221	121	129	281	612	473	864	174	301	]

Hypothetical CWM

A [	0.00	-0.00	0.01	0.01	0.00	0.02	0.01	-0.02	0.05	-0.01	-0.01	0.08	-0.01	-0.00	-0.01	-0.03	-0.04	-0.05	0.02	-0.01	0.02	-0.02	]
C [	-0.00	0.01	-0.00	0.01	0.04	0.00	-0.02	-0.00	-0.02	-0.04	-0.01	-0.04	0.02	-0.03	0.02	0.11	-0.01	0.09	-0.01	0.03	0.01	0.01	]
G [	-0.01	0.01	0.01	0.01	0.00	0.01	0.05	-0.01	0.03	0.00	0.09	-0.02	0.08	-0.01	-0.05	-0.03	-0.06	-0.01	-0.01	0.01	0.00	0.00	]
T [	0.01	-0.00	-0.00	-0.01	-0.02	-0.01	-0.02	0.04	-0.04	0.03	-0.04	-0.03	-0.06	0.03	0.03	-0.03	0.07	-0.01	0.01	0.00	-0.01	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 329

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 29

CWM

PFM

HCWM

5 profiles found for the same TF (ZNF274) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000857.1	ZNF274	ENCSR000EUI	GM08714	Homo sapiens	MA1592.2
BP000858.1	ZNF274	ENCSR000EUN	H1	Homo sapiens	MA1592.2
BP000860.1	ZNF274	ENCSR000EWY	NT2/D1	Homo sapiens	MA1592.2
BP000861.1	ZNF274	ENCSR101FJM	HCT116	Homo sapiens	MA1592.2
BP000862.1	ZNF274	ENCSR178QVJ	HEK293	Homo sapiens	MA1592.2