JASPAR - ZNF274 - BP000858.1

This page shows detailed deep learning-derived predictions and motifs for ZNF274 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF274
Model ID:	BP000858.1
Cell line/tissue:	H1
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1592.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q96GC6
Source:	ENCSR000EUN
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 811

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	0.01	0.00	-0.00	0.02	0.00	-0.00	0.07	-0.00	0.00	0.00	0.00	0.00	-0.00	0.01	-0.00	0.02	-0.00	]
C [	-0.00	-0.00	0.02	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	0.11	-0.00	0.07	-0.00	0.01	-0.00	0.00	]
G [	0.00	0.00	0.00	-0.00	0.03	-0.00	0.01	-0.00	0.09	-0.00	0.08	-0.00	-0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	-0.00	0.03	-0.00	0.03	0.00	-0.00	-0.00	0.03	0.02	0.00	0.06	-0.00	0.01	0.00	-0.00	0.00	]

Frequency matrix

A [	150	128	427	145	465	161	112	111	127	156	166	93	132	167	119	163	111	471	91	62	369	4	1	772	1	18	8	0	0	2	250	109	490	111	102	152	243	101	298	220	142	319	476	190	182	131	268	256	182	352	]
C [	99	320	98	111	102	119	90	102	151	107	74	384	99	431	95	425	568	44	31	42	0	0	0	0	1	7	168	811	2	638	57	303	53	100	63	136	144	216	110	179	131	94	99	110	100	132	127	88	151	117	]
G [	129	117	175	77	89	314	433	470	108	61	89	81	93	101	157	121	56	51	666	14	414	41	810	21	808	5	2	0	0	3	11	242	126	41	472	105	89	166	109	200	197	172	96	384	301	229	144	120	316	91	]
T [	433	246	111	478	155	217	176	128	425	487	482	253	487	112	440	102	76	245	23	693	28	766	0	18	1	781	633	0	809	168	493	157	142	559	174	418	335	328	294	212	341	226	140	127	228	319	272	347	162	251	]

Hypothetical CWM

A [	0.00	0.01	-0.00	0.01	0.01	-0.02	0.04	-0.01	-0.01	0.07	-0.02	-0.00	-0.01	-0.04	-0.03	-0.04	0.02	-0.01	0.03	-0.02	0.00	]
C [	-0.00	-0.00	0.03	-0.00	-0.02	-0.02	-0.02	-0.04	-0.04	-0.06	-0.00	-0.04	0.02	0.11	-0.01	0.08	-0.01	0.02	-0.01	0.01	-0.01	]
G [	-0.00	0.00	0.00	-0.01	0.03	-0.02	0.01	-0.01	0.09	-0.02	0.08	-0.02	-0.05	-0.04	-0.08	-0.03	-0.04	-0.01	-0.01	-0.00	0.00	]
T [	-0.00	-0.01	-0.02	-0.00	-0.02	0.04	-0.03	0.03	-0.04	-0.02	-0.05	0.03	0.02	-0.03	0.06	-0.01	0.01	0.00	-0.02	0.01	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 685

CWM

PFM

HCWM

5 profiles found for the same TF (ZNF274) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000857.1	ZNF274	ENCSR000EUI	GM08714	Homo sapiens	MA1592.2
BP000859.1	ZNF274	ENCSR000EVX	K562	Homo sapiens	MA1592.2
BP000860.1	ZNF274	ENCSR000EWY	NT2/D1	Homo sapiens	MA1592.2
BP000861.1	ZNF274	ENCSR101FJM	HCT116	Homo sapiens	MA1592.2
BP000862.1	ZNF274	ENCSR178QVJ	HEK293	Homo sapiens	MA1592.2