Detailed information of deep learning profile BP000853.1

  1. Home
  2. Deep Learning Profile > BP000853.1
This page shows detailed deep learning-derived predictions and motifs for NR2F1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2F1
Model ID: BP000853.1
Cell line/tissue: K562
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
JASPAR ID: MA0017.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P10589  
Source: ENCSR970NKQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.06 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.06 0.05 0.00 0.01 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 0.05 0.00 0.00 0.00 0.00 0.03 0.01 0.01 -0.00 -0.00 ]

Frequency matrix

       
A [ 2317 2601 2558 2616 2303 2393 2341 2191 2800 2503 2370 2554 2295 2187 2351 2317 1684 1646 10 282 10245 30 34 61 650 2031 2306 2466 2057 2276 2000 2141 2415 2458 2387 2237 2261 2361 2594 2378 2257 2423 2272 2430 2455 2394 2487 2393 2377 2508 ]
C [ 2944 2679 2814 2749 2724 2846 2474 2866 2514 3211 3011 3089 3071 3027 2838 3477 3464 3095 152 49 50 10294 10290 3107 4663 1850 2250 2549 2789 2829 3154 3131 3181 3189 3010 2966 2793 2677 2681 2731 3179 3036 2953 2917 2812 2749 2751 2835 2893 2708 ]
G [ 2468 2443 2383 2523 2821 2578 2618 2701 2640 2344 2501 2458 2396 2586 2506 2154 2311 2762 16 10010 56 3 13 26 942 2133 3746 3288 3163 2734 2490 2280 2091 2315 2342 2624 2580 2560 2452 2575 2448 2255 2274 2364 2395 2441 2459 2482 2457 2489 ]
T [ 2627 2633 2601 2468 2508 2539 2923 2598 2402 2298 2474 2255 2594 2556 2661 2408 2897 2853 10178 15 5 29 19 7162 4101 4342 2054 2053 2347 2517 2712 2804 2669 2394 2617 2529 2722 2758 2629 2672 2472 2642 2857 2645 2694 2772 2659 2646 2629 2651 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.01 0.00 -0.03 0.01 0.06 -0.00 -0.01 -0.04 -0.01 0.00 0.00 0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.01 -0.01 -0.01 0.06 0.05 0.02 0.02 -0.00 0.00 0.00 0.01 ]
G [ 0.00 0.00 0.01 0.01 -0.03 0.05 -0.01 -0.05 -0.02 -0.02 -0.01 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.01 0.05 -0.05 -0.05 -0.01 -0.02 0.04 0.01 0.01 -0.00 -0.01 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6054

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2255

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2219

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2080

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1242

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1125

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 579

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 528

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 523

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 366

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 208

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 96

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 91

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 84

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_21

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_22

Num. of seqlets: 24

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_23

Num. of seqlets: 23

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_24

Num. of seqlets: 20

CWM

PFM

     

HCWM

3 profiles found for the same TF (NR2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000850.1 NR2F1 ENCSR136OFY HepG2 Homo sapiens MA0017.3
BP000851.1 NR2F1 ENCSR514VYD GM12878 Homo sapiens MA0017.3
BP000852.1 NR2F1 ENCSR662EOU HepG2 Homo sapiens MA0017.3
Showing 3 profiles of page 1 from 1 pages
  • 1 (current)