Detailed information of deep learning profile BP000851.1

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This page shows detailed deep learning-derived predictions and motifs for NR2F1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2F1
Model ID: BP000851.1
Cell line/tissue: GM12878
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
JASPAR ID: MA0017.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P10589  
Source: ENCSR514VYD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.01 -0.00 -0.00 -0.00 0.00 0.03 0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.00 0.04 0.04 0.00 0.00 0.00 -0.00 0.00 0.00 0.01 ]
T [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.03 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3809 4886 3837 4242 3948 3815 4201 4823 3917 4113 3781 4240 4020 4047 3674 3775 3750 5047 3765 4161 4353 2951 3193 5947 6082 11481 37 14 1 3 16339 4526 5094 4980 3321 3010 2890 3552 4838 4965 3461 5201 3862 3534 5142 3622 3641 3487 3549 3690 ]
C [ 4057 3995 3861 3827 4886 4358 4031 3931 3726 3924 4553 4083 4155 3849 4241 3559 3526 3453 3681 5065 4496 6524 6614 4066 1693 26 2 0 124 16154 13 4105 2871 3142 3917 4232 4381 5408 3589 3669 4048 4227 5597 5630 4064 3958 5288 5319 3909 3844 ]
G [ 5485 4535 5622 5373 4461 4881 5165 4531 5882 5321 4502 5162 5216 5681 4781 6063 6049 5304 5126 4395 4431 3806 3220 2530 7920 5266 16682 16642 249 202 425 6030 6623 6040 6591 4678 4334 4298 5134 4705 5549 4022 3841 4183 4087 5548 4232 4327 4392 5831 ]
T [ 3470 3405 3501 3379 3526 3767 3424 3536 3296 3463 3985 3336 3430 3244 4125 3424 3496 3017 4249 3200 3541 3540 3794 4278 1126 48 100 165 16447 462 44 2160 2233 2659 2992 4901 5216 3563 3260 3482 3763 3371 3521 3474 3528 3693 3660 3688 4971 3456 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.01 0.01 0.02 -0.02 -0.01 -0.04 -0.04 0.03 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.01 0.00 -0.00 -0.01 -0.02 -0.03 0.00 0.03 -0.02 0.01 0.00 0.00 0.00 ]
G [ 0.01 0.00 0.00 -0.00 0.01 0.02 0.04 0.04 0.00 0.00 0.01 -0.00 0.00 0.01 0.01 ]
T [ -0.00 0.00 0.00 -0.00 -0.01 -0.03 -0.01 -0.00 0.03 0.00 -0.02 -0.00 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4302

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2693

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2183

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2170

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1081

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1029

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 731

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 532

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 520

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 512

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 416

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 350

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 293

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 242

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 223

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 65

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 65

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 43

CWM

PFM

     

HCWM

3 profiles found for the same TF (NR2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000850.1 NR2F1 ENCSR136OFY HepG2 Homo sapiens MA0017.3
BP000852.1 NR2F1 ENCSR662EOU HepG2 Homo sapiens MA0017.3
BP000853.1 NR2F1 ENCSR970NKQ K562 Homo sapiens MA0017.3
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