Detailed information of deep learning profile BP000853.1

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This page shows detailed deep learning-derived predictions and motifs for NR2F1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2F1
Model ID: BP000853.1
Cell line/tissue: K562
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
JASPAR ID: MA0017.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P10589  
Source: ENCSR970NKQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 0.01 0.03 0.00 0.00 0.00 0.00 0.05 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.01 0.00 0.05 0.06 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.06 0.00 0.00 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 2651 2629 2646 2659 2772 2694 2645 2857 2642 2472 2672 2629 2758 2722 2529 2617 2394 2669 2804 2712 2517 2347 2053 2054 4342 4101 7162 19 29 5 15 10178 2853 2897 2408 2661 2556 2594 2255 2474 2298 2402 2598 2923 2539 2508 2468 2601 2633 2627 ]
C [ 2489 2457 2482 2459 2441 2395 2364 2274 2255 2448 2575 2452 2560 2580 2624 2342 2315 2091 2280 2490 2734 3163 3288 3746 2133 942 26 13 3 56 10010 16 2762 2311 2154 2506 2586 2396 2458 2501 2344 2640 2701 2618 2578 2821 2523 2383 2443 2468 ]
G [ 2708 2893 2835 2751 2749 2812 2917 2953 3036 3179 2731 2681 2677 2793 2966 3010 3189 3181 3131 3154 2829 2789 2549 2250 1850 4663 3107 10290 10294 50 49 152 3095 3464 3477 2838 3027 3071 3089 3011 3211 2514 2866 2474 2846 2724 2749 2814 2679 2944 ]
T [ 2508 2377 2393 2487 2394 2455 2430 2272 2423 2257 2378 2594 2361 2261 2237 2387 2458 2415 2141 2000 2276 2057 2466 2306 2031 650 61 34 30 10245 282 10 1646 1684 2317 2351 2187 2295 2554 2370 2503 2800 2191 2341 2393 2303 2616 2558 2601 2317 ]

Hypothetical CWM

   
A [ -0.00 -0.01 -0.00 0.01 0.01 0.04 -0.02 -0.01 -0.05 -0.05 0.05 0.01 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 -0.01 -0.02 -0.02 -0.05 -0.01 0.05 -0.03 0.01 0.01 0.00 0.00 ]
G [ 0.01 0.00 0.00 -0.00 0.02 0.02 0.05 0.06 -0.01 -0.01 0.01 -0.00 0.01 0.01 0.01 ]
T [ -0.00 0.00 0.00 0.00 -0.01 -0.04 -0.01 -0.00 0.06 0.01 -0.03 0.00 -0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6054

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2255

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2219

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2080

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1242

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1125

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 579

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 528

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 523

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 366

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 208

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 96

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 91

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 84

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_21

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_22

Num. of seqlets: 24

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_23

Num. of seqlets: 23

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_24

Num. of seqlets: 20

CWM

PFM

     

HCWM

3 profiles found for the same TF (NR2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000850.1 NR2F1 ENCSR136OFY HepG2 Homo sapiens MA0017.3
BP000851.1 NR2F1 ENCSR514VYD GM12878 Homo sapiens MA0017.3
BP000852.1 NR2F1 ENCSR662EOU HepG2 Homo sapiens MA0017.3
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