Detailed information of deep learning profile BP000850.1

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This page shows detailed deep learning-derived predictions and motifs for NR2F1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2F1
Model ID: BP000850.1
Cell line/tissue: HepG2
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
JASPAR ID: MA0017.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P10589  
Source: ENCSR136OFY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.04 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.01 0.01 -0.00 0.00 -0.00 -0.00 0.04 0.05 0.00 0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.04 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.01 0.04 0.00 -0.00 -0.00 -0.00 0.02 0.01 0.01 -0.00 -0.00 ]

Frequency matrix

       
A [ 2916 2284 2160 3031 2381 2727 2443 2214 2348 2081 3161 2208 2429 2629 2190 2808 2481 1697 1391 1379 26 258 10174 578 33 23 654 1484 2078 2207 2112 2104 1861 1908 2142 2951 2951 2288 2143 2399 3008 2299 2206 2307 2367 2269 2281 2269 2624 2341 ]
C [ 2713 2667 3298 2633 2964 2805 2675 3314 2486 3356 2458 3562 2721 2850 3385 2521 2492 5277 4877 2826 221 33 112 9854 10478 2801 4388 2325 1926 2696 3278 3493 4233 3268 3455 2719 2620 2816 3007 2622 2658 2814 3433 3423 2718 3301 3296 3166 2825 3283 ]
G [ 2471 2429 2502 2535 2303 2640 3071 2514 2500 2549 2466 2258 2422 2995 2190 3359 3077 1623 1782 2187 56 10258 254 7 1 14 861 2581 4038 3834 3245 2649 1908 2113 2230 2438 2569 3038 2490 2915 2441 2363 2307 2315 2317 2370 2422 2348 2588 2384 ]
T [ 2456 3176 2596 2357 2908 2384 2367 2514 3222 2570 2471 2528 2984 2082 2791 1868 2506 1959 2506 4164 10253 7 16 117 44 7718 4653 4166 2514 1819 1921 2310 2554 3267 2729 2448 2416 2414 2916 2620 2449 3080 2610 2511 3154 2616 2557 2773 2519 2548 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.01 -0.01 -0.03 0.00 0.04 0.01 -0.02 -0.03 -0.01 -0.00 -0.00 0.00 -0.00 ]
C [ 0.01 0.02 0.01 -0.00 0.01 -0.01 -0.00 0.04 0.05 0.02 0.01 -0.00 0.00 0.01 0.01 ]
G [ 0.00 -0.00 0.00 0.00 -0.02 0.04 -0.00 -0.03 -0.02 -0.02 -0.01 0.00 0.01 0.01 0.00 ]
T [ -0.00 -0.01 0.00 0.02 0.04 -0.03 -0.04 -0.02 -0.01 0.03 0.01 0.01 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5889

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2298

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1088

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1037

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 607

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 499

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 280

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 277

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 188

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 65

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 36

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 29

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 26

CWM

PFM

     

HCWM

3 profiles found for the same TF (NR2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000851.1 NR2F1 ENCSR514VYD GM12878 Homo sapiens MA0017.3
BP000852.1 NR2F1 ENCSR662EOU HepG2 Homo sapiens MA0017.3
BP000853.1 NR2F1 ENCSR970NKQ K562 Homo sapiens MA0017.3
Showing 3 profiles of page 1 from 1 pages
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