Detailed information of deep learning profile BP000778.1

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This page shows detailed deep learning-derived predictions and motifs for TEAD4 in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000778.1
Cell line/tissue: HCT116
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR000BVJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.02 0.04 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.03 0.03 -0.00 0.00 0.00 0.02 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.01 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 881 934 857 855 970 788 836 931 849 923 896 827 655 923 961 633 779 1036 1279 739 973 856 427 571 553 1374 286 24 3126 3477 0 9 51 1088 903 786 815 885 947 857 757 1015 1070 797 855 950 835 878 952 901 ]
C [ 882 835 791 850 779 858 941 808 881 742 829 881 877 753 830 1006 835 1097 763 968 1020 771 1036 1257 1851 111 4 27 98 1 6 121 1517 675 541 777 815 815 815 734 1032 830 733 854 1008 818 868 873 823 990 ]
G [ 820 861 912 958 916 836 799 832 870 1009 946 748 856 938 873 877 592 761 785 737 788 724 1281 969 448 199 3183 3427 2 0 1 2601 3 1123 1394 900 1019 981 790 992 832 851 887 897 783 771 847 954 901 815 ]
T [ 896 849 919 816 814 997 903 908 879 805 808 1023 1091 865 815 963 1273 585 652 1035 698 1128 735 682 627 1795 6 1 253 1 3472 748 1908 593 641 1016 830 798 927 896 858 783 789 931 833 940 929 774 803 773 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.00 0.01 0.00 -0.01 0.02 0.04 -0.03 -0.03 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 -0.01 -0.00 0.00 -0.02 0.00 -0.00 0.02 0.00 -0.00 0.00 0.00 ]
G [ 0.01 0.01 0.00 -0.01 0.03 0.03 -0.03 -0.02 -0.03 0.02 -0.02 0.01 0.01 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.02 -0.01 0.00 -0.02 0.04 0.01 0.01 -0.01 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2886

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 293

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 254

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 200

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 94

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 65

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 43

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 39

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000771.1 TEAD4 ENCSR000BRK K562 Homo sapiens MA0809.3
BP000772.1 TEAD4 ENCSR000BRP HepG2 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000774.1 TEAD4 ENCSR000BSW Ishikawa Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000776.1 TEAD4 ENCSR000BUO MCF-7 Homo sapiens MA0809.3
BP000777.1 TEAD4 ENCSR000BUQ SK-N-SH Homo sapiens MA0809.3
BP000779.1 TEAD4 ENCSR285HHZ WTC11 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
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