Detailed information of deep learning profile BP000777.1

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This page shows detailed deep learning-derived predictions and motifs for TEAD4 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000777.1
Cell line/tissue: SK-N-SH
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR000BUQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.05 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.03 0.03 0.00 0.00 0.00 0.01 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.01 0.01 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 1036 1051 1081 1005 1027 998 1054 1041 1052 1029 1044 1031 1103 991 641 1103 1455 649 694 1157 2280 628 897 815 517 918 771 1557 40 32 3405 3769 0 1 100 1104 992 932 876 1029 1110 867 1037 1028 1043 989 1021 994 1059 1051 ]
C [ 831 850 814 875 848 884 856 874 867 872 848 763 741 784 666 619 813 1248 580 1688 412 812 1194 1069 1479 1064 1712 52 5 35 180 0 4 211 1523 853 695 779 909 792 783 871 846 830 806 872 884 866 856 873 ]
G [ 849 884 820 851 836 885 868 821 888 906 895 1019 1025 735 954 1198 721 1009 380 457 555 834 868 795 1028 648 450 116 3720 3688 2 0 0 2317 19 982 1174 945 963 889 898 968 891 841 850 884 871 890 846 855 ]
T [ 1054 985 1055 1039 1059 1003 992 1034 963 963 983 957 901 1260 1509 850 781 864 2116 468 523 1496 811 1091 746 1140 837 2045 5 15 183 1 3766 1241 2128 831 909 1114 1022 1060 979 1064 996 1071 1071 1025 994 1020 1009 991 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 0.01 0.01 -0.00 0.02 0.05 -0.03 -0.04 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.01 -0.00 -0.01 -0.01 0.01 -0.03 -0.00 0.00 0.02 0.01 0.00 0.00 0.00 ]
G [ 0.01 0.00 0.00 -0.01 0.03 0.03 -0.03 -0.02 -0.03 0.02 -0.02 0.01 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 0.01 -0.02 -0.01 0.00 -0.02 0.04 0.02 0.02 -0.00 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7440

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 824

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 745

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 732

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 588

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 317

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 252

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 239

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 161

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 74

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 30

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000771.1 TEAD4 ENCSR000BRK K562 Homo sapiens MA0809.3
BP000772.1 TEAD4 ENCSR000BRP HepG2 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000774.1 TEAD4 ENCSR000BSW Ishikawa Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000776.1 TEAD4 ENCSR000BUO MCF-7 Homo sapiens MA0809.3
BP000778.1 TEAD4 ENCSR000BVJ HCT116 Homo sapiens MA0809.3
BP000779.1 TEAD4 ENCSR285HHZ WTC11 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
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