Detailed information of deep learning profile BP000771.1

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This page shows detailed deep learning-derived predictions and motifs for TEAD4 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000771.1
Cell line/tissue: K562
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR000BRK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 0.03 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.01 0.01 0.00 0.02 0.00 0.00 0.00 0.02 0.02 -0.00 0.00 0.01 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.03 0.02 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 176 139 167 199 227 175 263 169 159 186 143 220 183 161 251 64 50 429 42 786 3 9 7 2 347 105 101 102 273 120 151 200 124 223 251 138 232 192 252 186 146 205 227 158 237 172 156 206 182 170 ]
C [ 197 250 213 212 164 166 190 240 220 193 329 195 279 272 182 436 400 0 736 1 1 2 764 757 42 96 409 452 133 199 230 132 151 139 137 246 172 208 186 172 237 193 185 198 175 261 271 248 194 170 ]
G [ 239 209 161 243 167 296 152 158 178 259 150 209 109 182 165 116 58 353 11 1 0 15 11 4 44 490 198 174 164 334 247 258 346 291 245 237 248 256 199 246 198 226 182 234 186 160 174 154 194 224 ]
T [ 177 191 248 135 231 152 184 222 232 151 167 165 218 174 191 173 281 7 0 1 785 763 7 26 356 98 81 61 219 136 161 199 168 136 156 168 137 133 152 185 208 165 195 199 191 196 188 181 219 225 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.00 -0.00 -0.01 0.01 0.00 0.03 -0.00 0.00 -0.00 -0.01 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.01 0.00 0.00 0.01 0.02 -0.01 0.02 -0.01 -0.01 -0.01 0.02 0.02 -0.00 0.01 0.01 0.01 0.00 0.01 0.01 0.00 ]
G [ 0.01 0.00 0.01 0.01 0.00 0.00 0.02 -0.00 0.00 -0.01 0.00 0.00 0.00 0.01 0.01 0.00 0.01 0.01 0.01 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.01 -0.01 -0.01 0.03 0.02 0.00 -0.00 0.00 -0.00 -0.00 -0.01 -0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 22984

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2997

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 725

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 564

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 288

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 55

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 20

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000772.1 TEAD4 ENCSR000BRP HepG2 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000774.1 TEAD4 ENCSR000BSW Ishikawa Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000776.1 TEAD4 ENCSR000BUO MCF-7 Homo sapiens MA0809.3
BP000777.1 TEAD4 ENCSR000BUQ SK-N-SH Homo sapiens MA0809.3
BP000778.1 TEAD4 ENCSR000BVJ HCT116 Homo sapiens MA0809.3
BP000779.1 TEAD4 ENCSR285HHZ WTC11 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
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