JASPAR - ESR1 - BP000769.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ESR1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESR1
Model ID:	BP000769.1
Cell line/tissue:	Ishikawa
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0112.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P03372
Source:	ENCSR000BQR
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 1654

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	0.01	-0.00	0.00	-0.00	-0.00	0.03	-0.00	-0.00	0.00	-0.00	0.00	0.04	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.01	0.00	0.00	-0.00	-0.00	-0.00	0.07	-0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.07	0.06	0.01	-0.00	0.00	0.00	]
G [	0.00	0.00	-0.00	0.01	0.05	0.04	0.01	-0.00	0.01	0.00	0.01	0.01	-0.00	0.08	-0.00	-0.00	-0.00	-0.00	0.00	0.01	0.00	]
T [	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.02	0.00	-0.00	0.00	-0.00	-0.00	0.05	-0.00	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.00	]

Frequency matrix

A [	419	452	409	391	391	402	363	415	464	412	513	426	360	373	468	377	439	788	130	240	155	1	1143	219	350	333	50	70	1401	14	153	65	359	335	428	417	370	391	354	383	412	410	379	347	381	422	411	357	354	346	]
C [	436	388	423	439	412	416	440	438	390	378	348	349	464	479	424	548	473	121	5	29	173	1557	22	479	338	410	199	22	182	1617	1397	532	309	341	391	457	499	425	422	393	416	391	463	500	481	437	445	439	476	498	]
G [	454	411	459	448	451	494	422	406	422	462	451	486	437	410	397	448	361	609	1396	1310	635	22	359	539	636	706	6	1561	46	1	3	78	571	633	497	380	443	393	471	451	455	492	427	415	412	436	426	458	420	397	]
T [	345	403	363	376	400	342	429	395	378	402	342	393	393	392	365	281	381	136	123	75	691	74	130	417	330	205	1399	1	25	22	101	979	415	345	338	400	342	445	407	427	371	361	385	392	380	359	372	400	404	413	]

Hypothetical CWM

A [	-0.01	0.00	-0.00	-0.00	0.01	-0.01	0.00	-0.02	-0.07	0.04	-0.01	-0.00	0.00	-0.03	0.01	0.05	-0.02	-0.00	-0.04	0.00	-0.00	-0.00	0.01	]
C [	0.01	0.00	0.01	0.01	0.00	-0.06	-0.04	-0.02	0.08	-0.06	0.02	0.01	0.01	0.04	-0.03	0.01	0.07	0.06	0.02	-0.00	0.00	0.00	-0.00	]
G [	-0.00	0.00	0.00	-0.00	0.02	0.06	0.05	0.02	-0.03	0.04	0.00	0.01	0.01	-0.06	0.08	-0.03	-0.05	-0.07	0.00	0.01	0.02	0.00	0.00	]
T [	0.00	-0.00	-0.01	0.01	-0.03	-0.01	-0.01	0.03	0.01	-0.03	0.00	-0.01	-0.01	0.05	-0.07	-0.03	-0.01	-0.01	0.02	-0.00	-0.00	0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1331

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 358

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 137

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 91

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 38

CWM

PFM

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000763.1	ESR1	ENCSR000BIY	Ishikawa	Homo sapiens	MA0112.4
BP000764.1	ESR1	ENCSR000BJS	T47D	Homo sapiens	MA0112.4
BP000765.1	ESR1	ENCSR000BKL	Ishikawa	Homo sapiens	MA0112.4
BP000766.1	ESR1	ENCSR000BKN	T47D	Homo sapiens	MA0112.4
BP000767.1	ESR1	ENCSR000BLL	T47D	Homo sapiens	MA0112.4
BP000768.1	ESR1	ENCSR000BQD	T47D	Homo sapiens	MA0112.4
BP000770.1	ESR1	ENCSR463GOT	MCF-7	Homo sapiens	MA0112.4