Detailed information of deep learning profile BP000767.1

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This page shows detailed deep learning-derived predictions and motifs for ESR1 in T47D using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESR1
Model ID: BP000767.1
Cell line/tissue: T47D
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0112.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P03372  
Source: ENCSR000BLL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.04 0.00 -0.00 -0.00 -0.00 0.00 0.04 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.06 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.06 0.04 0.00 -0.00 -0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 0.00 0.04 0.05 0.00 -0.00 0.00 -0.00 0.00 0.01 -0.00 0.05 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.02 0.00 -0.00 -0.00 -0.00 0.00 0.04 0.00 -0.00 0.00 -0.00 0.02 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 206 199 187 185 198 232 209 214 191 200 226 196 209 193 218 178 232 395 70 77 116 19 615 143 160 123 16 82 673 7 105 33 198 158 239 216 203 212 167 199 221 204 190 185 197 214 203 199 210 204 ]
C [ 188 173 184 199 164 162 171 168 199 160 170 155 152 178 183 240 185 43 4 16 34 691 7 224 169 185 47 12 34 735 608 151 87 139 163 175 170 146 169 157 125 168 188 189 179 170 176 166 170 180 ]
G [ 164 162 184 167 191 183 181 169 158 195 134 189 195 185 142 163 152 263 581 623 218 8 78 219 261 322 5 637 19 2 3 35 265 294 181 147 180 178 198 187 193 168 176 169 183 175 166 174 186 168 ]
T [ 192 216 195 199 197 173 189 199 202 195 220 210 194 194 207 169 181 49 95 34 382 32 50 164 160 120 682 19 24 6 34 531 200 159 167 212 197 214 216 207 211 210 196 207 191 191 205 211 184 198 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.01 0.03 -0.01 -0.00 -0.01 -0.03 0.04 0.00 -0.00 -0.00 -0.02 0.02 0.04 -0.01 0.01 -0.02 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.01 0.01 0.01 -0.00 -0.03 -0.03 -0.03 0.06 -0.04 0.02 0.02 0.00 0.03 -0.04 0.01 0.06 0.05 0.02 -0.00 -0.00 0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 0.01 0.05 0.05 0.01 -0.03 0.03 0.00 0.02 0.02 -0.04 0.06 -0.03 -0.03 -0.04 -0.01 0.01 0.01 0.00 -0.00 ]
T [ 0.00 0.01 0.01 0.00 -0.02 0.01 -0.01 0.04 0.02 -0.02 0.00 -0.00 0.01 0.04 -0.03 -0.01 0.00 -0.01 0.03 0.01 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 1027

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 431

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 71

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 47

CWM

PFM

     

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000763.1 ESR1 ENCSR000BIY Ishikawa Homo sapiens MA0112.4
BP000764.1 ESR1 ENCSR000BJS T47D Homo sapiens MA0112.4
BP000765.1 ESR1 ENCSR000BKL Ishikawa Homo sapiens MA0112.4
BP000766.1 ESR1 ENCSR000BKN T47D Homo sapiens MA0112.4
BP000768.1 ESR1 ENCSR000BQD T47D Homo sapiens MA0112.4
BP000769.1 ESR1 ENCSR000BQR Ishikawa Homo sapiens MA0112.4
BP000770.1 ESR1 ENCSR463GOT MCF-7 Homo sapiens MA0112.4
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