Detailed information of deep learning profile BP000770.1

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This page shows detailed deep learning-derived predictions and motifs for ESR1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESR1
Model ID: BP000770.1
Cell line/tissue: MCF-7
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0112.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P03372  
Source: ENCSR463GOT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.02 -0.00 0.00 -0.00 -0.00 0.04 0.00 -0.00 0.00 -0.00 0.00 0.07 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.07 -0.00 0.01 0.01 0.00 0.00 0.00 0.00 0.10 0.06 0.01 -0.00 -0.00 0.00 0.00 ]
G [ 0.00 -0.00 -0.00 0.00 0.06 0.06 0.00 -0.00 0.01 0.00 0.01 0.01 -0.00 0.10 -0.00 -0.00 -0.00 -0.00 0.01 0.01 0.00 -0.00 ]
T [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.03 0.00 -0.00 -0.00 -0.00 -0.00 0.08 -0.00 -0.00 0.00 -0.00 0.03 0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 2520 2382 2269 2507 2431 2297 2200 2239 2326 2260 2550 2545 2301 2519 2141 2182 2927 5157 1012 1130 1330 106 6071 1657 1927 1841 63 372 8303 37 1412 450 2156 2322 2642 2525 2132 2211 2346 2191 2416 2230 2251 2401 2202 2407 2206 2269 2430 2275 ]
C [ 2378 2298 2556 2557 2301 2573 2625 2578 2422 2278 2433 2312 2423 2189 2717 3218 2581 801 102 241 1062 7234 335 3439 2761 2763 742 144 1129 9606 7495 2856 1798 1797 2157 2654 2716 2480 2208 2514 2267 2518 2778 2607 2613 2365 2590 2713 2361 2821 ]
G [ 2336 2484 2624 2453 2588 2666 2400 2366 2471 2764 2544 2439 2767 2796 2669 2071 2448 2989 7691 7770 2423 662 2307 2632 2906 3815 19 9192 128 4 41 502 3233 3396 2884 2213 2398 2282 2585 2695 2559 2751 2460 2357 2644 2448 2625 2422 2550 2328 ]
T [ 2479 2549 2264 2196 2393 2177 2488 2530 2494 2411 2186 2417 2222 2209 2186 2242 1757 766 908 572 4898 1711 1000 1985 2119 1294 8889 5 153 66 765 5905 2526 2198 2030 2321 2467 2740 2574 2313 2471 2214 2224 2348 2254 2493 2292 2309 2372 2289 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.00 0.04 -0.01 0.01 -0.02 -0.08 0.06 0.01 -0.01 0.01 -0.05 0.03 0.08 -0.03 0.01 -0.04 0.01 0.01 0.00 0.01 ]
C [ 0.00 0.01 0.02 0.02 -0.00 -0.06 -0.06 -0.02 0.09 -0.05 0.02 0.03 0.01 0.05 -0.04 0.01 0.11 0.07 0.03 0.00 -0.00 0.00 0.01 ]
G [ 0.01 0.00 -0.00 0.00 0.02 0.07 0.07 0.01 -0.03 0.04 0.01 0.02 0.02 -0.07 0.10 -0.04 -0.08 -0.06 -0.01 0.02 0.02 0.01 -0.00 ]
T [ 0.00 0.00 0.01 0.01 -0.04 0.00 -0.02 0.06 0.03 -0.04 0.00 -0.00 0.00 0.08 -0.09 -0.03 0.01 -0.01 0.05 0.00 0.00 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 8242

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3594

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2868

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2004

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 638

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 395

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 351

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 336

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 278

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 179

CWM

PFM

     

HCWM

Motif name: counts.neg_patterns.pattern_0

Num. of seqlets: 43

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 39

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 28

CWM

PFM

     

HCWM

Motif name: counts.neg_patterns.pattern_1

Num. of seqlets: 27

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 25

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 24

CWM

PFM

     

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000763.1 ESR1 ENCSR000BIY Ishikawa Homo sapiens MA0112.4
BP000764.1 ESR1 ENCSR000BJS T47D Homo sapiens MA0112.4
BP000765.1 ESR1 ENCSR000BKL Ishikawa Homo sapiens MA0112.4
BP000766.1 ESR1 ENCSR000BKN T47D Homo sapiens MA0112.4
BP000767.1 ESR1 ENCSR000BLL T47D Homo sapiens MA0112.4
BP000768.1 ESR1 ENCSR000BQD T47D Homo sapiens MA0112.4
BP000769.1 ESR1 ENCSR000BQR Ishikawa Homo sapiens MA0112.4
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