Detailed information of deep learning profile BP000765.1

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This page shows detailed deep learning-derived predictions and motifs for ESR1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESR1
Model ID: BP000765.1
Cell line/tissue: Ishikawa
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0112.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P03372  
Source: ENCSR000BKL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 0.07 -0.00 -0.00 0.00 -0.00 0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.01 -0.00 0.00 -0.00 -0.00 0.10 -0.00 0.01 0.01 0.00 0.00 -0.00 0.01 0.06 0.06 0.01 -0.00 0.00 0.00 ]
G [ 0.00 -0.00 -0.00 0.01 0.07 0.09 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.09 -0.00 -0.00 0.00 0.00 0.01 0.01 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.06 0.00 -0.00 -0.00 -0.00 -0.00 0.04 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 723 737 726 691 678 705 725 718 640 752 763 731 856 624 714 587 663 756 1717 173 23 20 1 2737 331 614 743 336 56 1271 133 355 256 622 565 655 706 706 745 627 739 755 774 787 635 745 701 657 675 639 ]
C [ 665 716 707 684 734 726 677 684 883 723 753 751 622 729 646 801 1075 864 97 0 3 42 2773 4 1192 1046 886 330 14 1018 2382 2155 963 656 667 749 714 720 769 743 754 722 667 693 879 777 742 770 733 753 ]
G [ 822 783 771 789 709 798 830 801 674 652 669 736 691 865 785 694 558 560 930 2400 2826 244 35 85 794 670 783 55 2788 298 40 12 225 778 915 713 719 795 627 636 660 641 694 747 665 690 744 716 668 687 ]
T [ 651 625 657 697 740 632 629 658 664 734 676 643 692 643 716 779 565 681 117 288 9 2555 52 35 544 531 449 2140 3 274 306 339 1417 805 714 744 722 640 720 855 708 743 726 634 682 649 674 718 785 782 ]

Hypothetical CWM

   
A [ -0.01 0.00 -0.01 -0.00 0.03 -0.00 -0.01 -0.04 -0.08 0.07 0.00 -0.00 -0.00 -0.03 0.02 0.04 -0.01 -0.00 -0.04 -0.00 -0.00 -0.00 0.01 ]
C [ -0.00 0.00 0.02 0.02 -0.00 -0.09 -0.06 -0.03 0.10 -0.07 0.02 0.02 0.01 0.05 -0.03 0.02 0.07 0.07 0.02 0.00 0.00 0.01 -0.00 ]
G [ 0.00 0.01 -0.00 0.00 0.03 0.08 0.09 0.02 -0.03 0.05 0.01 0.01 0.02 -0.05 0.09 -0.02 -0.05 -0.07 0.00 0.02 0.02 0.00 0.00 ]
T [ 0.01 -0.00 0.00 0.00 -0.04 0.00 -0.02 0.06 0.02 -0.04 -0.00 0.00 0.00 0.05 -0.07 -0.03 -0.00 -0.00 0.02 -0.00 -0.00 0.00 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3490

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1650

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1091

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 893

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 704

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 612

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 563

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 333

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 328

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 84

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 76

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 38

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 35

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 27

CWM

PFM

     

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000763.1 ESR1 ENCSR000BIY Ishikawa Homo sapiens MA0112.4
BP000764.1 ESR1 ENCSR000BJS T47D Homo sapiens MA0112.4
BP000766.1 ESR1 ENCSR000BKN T47D Homo sapiens MA0112.4
BP000767.1 ESR1 ENCSR000BLL T47D Homo sapiens MA0112.4
BP000768.1 ESR1 ENCSR000BQD T47D Homo sapiens MA0112.4
BP000769.1 ESR1 ENCSR000BQR Ishikawa Homo sapiens MA0112.4
BP000770.1 ESR1 ENCSR463GOT MCF-7 Homo sapiens MA0112.4
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