JASPAR - ESR1 - BP000769.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ESR1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESR1
Model ID:	BP000769.1
Cell line/tissue:	Ishikawa
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0112.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P03372
Source:	ENCSR000BQR
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 1654

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	-0.00	0.05	-0.00	-0.00	0.00	-0.00	0.00	0.02	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.01	0.00	-0.00	-0.00	-0.00	-0.00	0.08	-0.00	0.01	0.01	0.00	0.01	-0.00	0.01	0.04	0.05	0.01	-0.00	0.00	0.00	]
G [	0.00	0.00	-0.00	0.01	0.06	0.07	0.00	-0.00	0.00	0.00	0.00	0.00	-0.00	0.07	-0.00	-0.00	-0.00	0.00	0.00	0.01	0.00	]
T [	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.04	0.00	-0.00	0.00	-0.00	-0.00	0.03	-0.00	-0.00	0.00	-0.00	0.01	-0.00	-0.00	0.00	]

Frequency matrix

A [	413	404	400	372	359	380	392	385	361	371	427	407	445	342	400	338	345	415	979	101	22	25	1	1399	205	330	417	130	74	691	75	123	136	381	281	365	392	393	393	342	402	378	395	429	342	400	376	363	403	345	]
C [	397	420	458	426	436	412	415	427	492	455	451	471	393	443	380	497	633	571	78	3	1	46	1561	6	706	636	539	359	22	635	1310	1396	609	361	448	397	410	437	486	451	462	422	406	422	494	451	448	459	411	454	]
G [	498	476	439	445	437	481	500	463	391	416	393	422	425	499	457	391	341	309	532	1397	1617	182	22	199	410	338	479	22	1557	173	29	5	121	473	548	424	479	464	349	348	378	390	438	440	416	412	439	423	388	436	]
T [	346	354	357	411	422	381	347	379	410	412	383	354	391	370	417	428	335	359	65	153	14	1401	70	50	333	350	219	1143	1	155	240	130	788	439	377	468	373	360	426	513	412	464	415	363	402	391	391	409	452	419	]

Hypothetical CWM

A [	-0.01	0.00	-0.00	-0.00	0.02	-0.01	-0.01	-0.03	-0.07	0.05	-0.01	-0.01	0.00	-0.03	0.01	0.03	-0.01	-0.01	-0.03	0.01	-0.01	-0.00	0.00	]
C [	0.00	0.00	0.02	0.01	0.00	-0.07	-0.05	-0.03	0.08	-0.06	0.01	0.01	0.00	0.04	-0.03	0.02	0.05	0.06	0.02	-0.00	0.00	0.00	-0.00	]
G [	-0.00	0.00	0.00	-0.00	0.02	0.06	0.07	0.01	-0.03	0.04	0.01	0.01	0.02	-0.06	0.08	-0.02	-0.04	-0.06	0.00	0.01	0.01	0.00	0.01	]
T [	0.01	-0.00	-0.00	0.00	-0.04	-0.00	-0.02	0.05	0.01	-0.03	0.00	-0.00	-0.01	0.04	-0.07	-0.02	0.00	-0.01	0.01	-0.00	-0.00	0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1331

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 358

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 137

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 91

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 38

CWM

PFM

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000763.1	ESR1	ENCSR000BIY	Ishikawa	Homo sapiens	MA0112.4
BP000764.1	ESR1	ENCSR000BJS	T47D	Homo sapiens	MA0112.4
BP000765.1	ESR1	ENCSR000BKL	Ishikawa	Homo sapiens	MA0112.4
BP000766.1	ESR1	ENCSR000BKN	T47D	Homo sapiens	MA0112.4
BP000767.1	ESR1	ENCSR000BLL	T47D	Homo sapiens	MA0112.4
BP000768.1	ESR1	ENCSR000BQD	T47D	Homo sapiens	MA0112.4
BP000770.1	ESR1	ENCSR463GOT	MCF-7	Homo sapiens	MA0112.4