JASPAR - ESR1 - BP000766.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ESR1 in T47D using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESR1
Model ID:	BP000766.1
Cell line/tissue:	T47D
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0112.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P03372
Source:	ENCSR000BKN
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 8228

Contribution weight matrix (CWM)

A [	0.00	-0.00	0.00	0.01	-0.00	0.00	-0.00	-0.00	0.03	0.00	-0.00	0.00	-0.00	0.00	0.05	-0.00	0.00	-0.00	0.00	0.00	0.00	]
C [	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.06	-0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.08	0.05	0.01	-0.00	-0.00	0.00	]
G [	0.00	-0.00	-0.00	0.00	0.05	0.05	0.00	-0.00	0.01	0.00	0.00	0.00	-0.00	0.08	-0.00	-0.00	-0.00	-0.00	0.01	0.01	-0.00	]
T [	-0.00	0.00	-0.00	-0.00	0.00	-0.00	0.02	0.00	-0.00	-0.00	-0.00	-0.00	0.06	-0.00	-0.00	0.00	-0.00	0.02	0.00	-0.00	-0.00	]

Frequency matrix

A [	2247	2185	2056	2206	2205	2229	2129	2234	2253	2092	2305	2183	2179	2251	2073	2021	2668	4379	966	1175	1612	74	5543	1620	1736	1787	80	317	6802	49	1857	533	2055	1945	2346	2245	2294	2190	2203	2194	2348	2109	2219	2119	2171	2223	2156	2171	2107	2178	]
C [	1926	1839	1996	1987	1815	1907	1975	1981	1945	1880	1878	1900	1921	1783	2135	2520	2229	543	40	283	768	6441	260	2577	2288	2311	385	83	932	8096	5657	2343	1320	1533	1843	2163	1972	1808	1793	1811	1683	1859	2020	2066	1977	1889	1922	1931	1933	1938	]
G [	1861	1930	2042	1902	1993	2060	1903	1904	1823	2087	1960	1954	2004	2080	1975	1651	1832	2508	6455	6121	2030	381	1422	2321	2339	2864	14	7820	158	17	5	388	2419	2810	2094	1796	1883	1907	2006	2034	2005	2135	1953	1867	1900	1945	1986	2002	2011	1946	]
T [	2194	2274	2134	2133	2215	2032	2221	2109	2207	2169	2085	2191	2124	2114	2045	2036	1499	798	767	649	3818	1332	1003	1710	1865	1266	7749	8	336	66	709	4964	2434	1940	1945	2024	2079	2323	2226	2189	2192	2125	2036	2176	2180	2171	2164	2124	2177	2166	]

Hypothetical CWM

A [	-0.00	-0.00	-0.00	0.00	0.03	-0.01	-0.00	-0.01	-0.06	0.05	0.01	-0.01	0.01	-0.04	0.02	0.05	-0.02	0.01	-0.03	0.00	0.00	0.00	0.00	]
C [	-0.00	0.00	0.01	0.01	-0.01	-0.06	-0.04	-0.03	0.08	-0.05	0.02	0.02	0.00	0.04	-0.03	0.01	0.09	0.07	0.02	-0.01	-0.01	0.00	0.00	]
G [	0.00	0.00	-0.01	-0.01	0.02	0.06	0.06	0.01	-0.03	0.04	0.00	0.02	0.01	-0.06	0.09	-0.04	-0.06	-0.08	-0.01	0.02	0.01	-0.00	-0.00	]
T [	0.00	0.00	0.00	-0.00	-0.03	0.00	-0.01	0.04	0.02	-0.03	0.00	-0.00	0.00	0.06	-0.08	-0.02	-0.01	-0.01	0.03	0.00	-0.00	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4627

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2528

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 751

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 518

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 359

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 190

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 175

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 22

CWM

PFM

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000763.1	ESR1	ENCSR000BIY	Ishikawa	Homo sapiens	MA0112.4
BP000764.1	ESR1	ENCSR000BJS	T47D	Homo sapiens	MA0112.4
BP000765.1	ESR1	ENCSR000BKL	Ishikawa	Homo sapiens	MA0112.4
BP000767.1	ESR1	ENCSR000BLL	T47D	Homo sapiens	MA0112.4
BP000768.1	ESR1	ENCSR000BQD	T47D	Homo sapiens	MA0112.4
BP000769.1	ESR1	ENCSR000BQR	Ishikawa	Homo sapiens	MA0112.4
BP000770.1	ESR1	ENCSR463GOT	MCF-7	Homo sapiens	MA0112.4