JASPAR - ESR1 - BP000766.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ESR1 in T47D using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESR1
Model ID:	BP000766.1
Cell line/tissue:	T47D
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0112.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P03372
Source:	ENCSR000BKN
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 8228

Contribution weight matrix (CWM)

A [	-0.00	-0.00	0.00	0.02	-0.00	0.00	-0.00	-0.00	0.06	-0.00	-0.00	-0.00	-0.00	0.00	0.02	-0.00	0.00	-0.00	-0.00	0.00	-0.00	]
C [	-0.00	0.01	0.01	-0.00	-0.00	-0.00	-0.00	0.08	-0.00	0.00	0.00	0.00	0.01	-0.00	0.00	0.05	0.05	0.00	-0.00	-0.00	0.00	]
G [	0.00	-0.00	-0.00	0.01	0.05	0.08	0.00	-0.00	0.00	0.00	0.00	0.00	-0.00	0.06	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	]
T [	0.00	0.00	0.00	-0.00	0.00	-0.00	0.05	0.00	-0.00	0.00	-0.00	0.00	0.03	-0.00	-0.00	0.00	-0.00	0.01	0.00	-0.00	0.00	]

Frequency matrix

A [	2166	2177	2124	2164	2171	2180	2176	2036	2125	2192	2189	2226	2323	2079	2024	1945	1940	2434	4964	709	66	336	8	7749	1266	1865	1710	1003	1332	3818	649	767	798	1499	2036	2045	2114	2124	2191	2085	2169	2207	2109	2221	2032	2215	2133	2134	2274	2194	]
C [	1946	2011	2002	1986	1945	1900	1867	1953	2135	2005	2034	2006	1907	1883	1796	2094	2810	2419	388	5	17	158	7820	14	2864	2339	2321	1422	381	2030	6121	6455	2508	1832	1651	1975	2080	2004	1954	1960	2087	1823	1904	1903	2060	1993	1902	2042	1930	1861	]
G [	1938	1933	1931	1922	1889	1977	2066	2020	1859	1683	1811	1793	1808	1972	2163	1843	1533	1320	2343	5657	8096	932	83	385	2311	2288	2577	260	6441	768	283	40	543	2229	2520	2135	1783	1921	1900	1878	1880	1945	1981	1975	1907	1815	1987	1996	1839	1926	]
T [	2178	2107	2171	2156	2223	2171	2119	2219	2109	2348	2194	2203	2190	2294	2245	2346	1945	2055	533	1857	49	6802	317	80	1787	1736	1620	5543	74	1612	1175	966	4379	2668	2021	2073	2251	2179	2183	2305	2092	2253	2234	2129	2229	2205	2206	2056	2185	2247	]

Hypothetical CWM

A [	-0.00	0.00	-0.00	0.00	0.03	-0.01	-0.01	-0.02	-0.08	0.06	0.00	-0.00	0.00	-0.03	0.02	0.04	-0.01	0.00	-0.03	-0.00	0.00	0.00	0.00	]
C [	-0.00	-0.00	0.01	0.02	-0.01	-0.08	-0.06	-0.04	0.09	-0.06	0.01	0.02	0.00	0.04	-0.03	0.01	0.06	0.06	0.02	-0.01	-0.01	0.00	0.00	]
G [	0.00	0.00	-0.01	-0.01	0.02	0.07	0.09	0.01	-0.03	0.04	0.00	0.02	0.02	-0.05	0.08	-0.03	-0.04	-0.06	-0.01	0.01	0.01	0.00	-0.00	]
T [	0.00	0.00	0.00	0.00	-0.03	0.01	-0.02	0.05	0.02	-0.04	0.01	-0.01	0.01	0.05	-0.06	-0.01	-0.00	-0.01	0.03	0.00	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4627

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2528

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 751

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 518

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 359

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 190

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 175

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 22

CWM

PFM

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000763.1	ESR1	ENCSR000BIY	Ishikawa	Homo sapiens	MA0112.4
BP000764.1	ESR1	ENCSR000BJS	T47D	Homo sapiens	MA0112.4
BP000765.1	ESR1	ENCSR000BKL	Ishikawa	Homo sapiens	MA0112.4
BP000767.1	ESR1	ENCSR000BLL	T47D	Homo sapiens	MA0112.4
BP000768.1	ESR1	ENCSR000BQD	T47D	Homo sapiens	MA0112.4
BP000769.1	ESR1	ENCSR000BQR	Ishikawa	Homo sapiens	MA0112.4
BP000770.1	ESR1	ENCSR463GOT	MCF-7	Homo sapiens	MA0112.4