JASPAR - ESR1 - BP000764.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ESR1 in T47D using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESR1
Model ID:	BP000764.1
Cell line/tissue:	T47D
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0112.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P03372
Source:	ENCSR000BJS
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 9175

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.01	-0.00	0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.00	0.03	-0.00	0.00	-0.00	0.00	0.00	0.00	]
C [	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.04	-0.00	0.00	0.00	0.00	0.00	0.00	0.06	0.04	0.00	-0.00	-0.00	0.00	]
G [	-0.00	-0.00	0.00	0.03	0.03	0.00	-0.00	0.00	0.00	0.00	-0.00	0.06	-0.00	-0.00	-0.00	-0.00	0.00	0.00	-0.00	]
T [	0.00	-0.00	-0.00	-0.00	-0.00	0.01	0.00	-0.00	-0.00	-0.00	0.04	0.00	-0.00	0.00	-0.00	0.01	0.00	-0.00	-0.00	]

Frequency matrix

A [	2535	2376	2380	2478	2494	2435	2423	2415	2453	2377	2454	2350	2491	2451	2445	2261	3030	4264	1621	1757	1959	495	5061	2183	1877	2276	71	300	7819	41	1749	499	2604	2137	2589	2563	2446	2601	2401	2438	2549	2286	2520	2348	2443	2402	2435	2455	2400	2402	]
C [	2127	2170	2220	2195	2050	2213	2216	2191	2174	2123	2093	2186	2165	2115	2213	2753	2367	1045	512	548	1141	5814	748	2567	2509	2480	325	77	934	9067	6870	2524	1204	1666	2262	2379	2402	1895	1857	1958	1868	2067	2184	2324	2167	2108	2116	2154	2108	2195	]
G [	2088	2195	2166	2139	2207	2243	2031	2130	2105	2282	2152	2163	2114	2246	2161	1862	2019	2690	5838	5650	2563	754	1801	2375	2748	2993	19	8781	145	12	6	397	2859	3514	2321	1900	2012	2115	2268	2251	2180	2380	2109	2044	2081	2211	2197	2162	2217	2175	]
T [	2425	2434	2409	2363	2424	2284	2505	2439	2443	2393	2476	2476	2405	2363	2356	2299	1759	1176	1204	1220	3512	2112	1565	2050	2041	1426	8760	17	277	55	550	5755	2508	1858	2003	2333	2315	2564	2649	2528	2578	2442	2362	2459	2484	2454	2427	2404	2450	2403	]

Hypothetical CWM

A [	-0.00	-0.00	0.00	0.02	-0.00	0.00	-0.01	-0.04	0.03	0.01	-0.00	0.00	-0.03	0.01	0.04	-0.02	0.01	-0.02	0.00	0.00	0.00	0.00	]
C [	-0.00	0.01	0.01	-0.00	-0.03	-0.03	-0.01	0.05	-0.03	0.01	0.01	0.01	0.03	-0.02	0.01	0.06	0.05	0.02	-0.01	-0.00	0.01	0.01	]
G [	0.00	-0.00	-0.00	0.01	0.04	0.04	0.01	-0.02	0.02	0.00	0.01	0.01	-0.04	0.06	-0.02	-0.04	-0.05	-0.00	0.01	0.01	-0.00	-0.00	]
T [	0.00	0.00	-0.00	-0.02	0.00	-0.01	0.02	0.02	-0.02	0.00	-0.00	0.00	0.05	-0.05	-0.01	0.00	-0.01	0.02	0.00	-0.00	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1004

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 794

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 252

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 238

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 229

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 115

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 61

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 31

CWM

PFM

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000763.1	ESR1	ENCSR000BIY	Ishikawa	Homo sapiens	MA0112.4
BP000765.1	ESR1	ENCSR000BKL	Ishikawa	Homo sapiens	MA0112.4
BP000766.1	ESR1	ENCSR000BKN	T47D	Homo sapiens	MA0112.4
BP000767.1	ESR1	ENCSR000BLL	T47D	Homo sapiens	MA0112.4
BP000768.1	ESR1	ENCSR000BQD	T47D	Homo sapiens	MA0112.4
BP000769.1	ESR1	ENCSR000BQR	Ishikawa	Homo sapiens	MA0112.4
BP000770.1	ESR1	ENCSR463GOT	MCF-7	Homo sapiens	MA0112.4