JASPAR - ESR1 - BP000764.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ESR1 in T47D using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESR1
Model ID:	BP000764.1
Cell line/tissue:	T47D
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0112.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P03372
Source:	ENCSR000BJS
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 9175

Contribution weight matrix (CWM)

A [	-0.00	-0.00	0.00	0.01	-0.00	0.00	-0.00	0.00	0.04	-0.00	-0.00	-0.00	0.00	0.01	-0.00	-0.00	-0.00	-0.00	0.00	]
C [	-0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.06	-0.00	0.00	0.00	0.00	-0.00	0.00	0.03	0.03	0.00	-0.00	-0.00	]
G [	0.00	-0.00	-0.00	0.00	0.04	0.06	0.00	0.00	0.00	0.00	0.00	-0.00	0.04	-0.00	-0.00	-0.00	-0.00	0.00	0.00	]
T [	0.00	0.00	0.00	-0.00	0.00	-0.00	0.03	0.00	-0.00	-0.00	0.00	0.02	-0.00	-0.00	0.00	-0.00	0.01	0.00	-0.00	]

Frequency matrix

A [	2403	2450	2404	2427	2454	2484	2459	2362	2442	2578	2528	2649	2564	2315	2333	2003	1858	2508	5755	550	55	277	17	8760	1426	2041	2050	1565	2112	3512	1220	1204	1176	1759	2299	2356	2363	2405	2476	2476	2393	2443	2439	2505	2284	2424	2363	2409	2434	2425	]
C [	2175	2217	2162	2197	2211	2081	2044	2109	2380	2180	2251	2268	2115	2012	1900	2321	3514	2859	397	6	12	145	8781	19	2993	2748	2375	1801	754	2563	5650	5838	2690	2019	1862	2161	2246	2114	2163	2152	2282	2105	2130	2031	2243	2207	2139	2166	2195	2088	]
G [	2195	2108	2154	2116	2108	2167	2324	2184	2067	1868	1958	1857	1895	2402	2379	2262	1666	1204	2524	6870	9067	934	77	325	2480	2509	2567	748	5814	1141	548	512	1045	2367	2753	2213	2115	2165	2186	2093	2123	2174	2191	2216	2213	2050	2195	2220	2170	2127	]
T [	2402	2400	2455	2435	2402	2443	2348	2520	2286	2549	2438	2401	2601	2446	2563	2589	2137	2604	499	1749	41	7819	300	71	2276	1877	2183	5061	495	1959	1757	1621	4264	3030	2261	2445	2451	2491	2350	2454	2377	2453	2415	2423	2435	2494	2478	2380	2376	2535	]

Hypothetical CWM

A [	-0.00	0.00	-0.00	0.00	0.02	-0.01	0.00	-0.01	-0.05	0.05	0.00	-0.00	0.00	-0.02	0.02	0.02	-0.01	0.00	-0.02	-0.00	0.00	0.00	]
C [	-0.00	-0.00	0.01	0.01	-0.00	-0.05	-0.04	-0.02	0.06	-0.04	0.01	0.01	0.00	0.02	-0.02	0.01	0.04	0.04	0.01	-0.00	-0.00	0.00	]
G [	0.01	0.01	-0.00	-0.01	0.02	0.05	0.06	0.01	-0.02	0.03	0.01	0.01	0.01	-0.03	0.05	-0.01	-0.03	-0.03	-0.00	0.01	0.01	-0.00	]
T [	0.00	0.00	0.00	0.00	-0.02	0.01	-0.02	0.04	0.01	-0.03	0.00	-0.00	0.01	0.03	-0.04	-0.01	0.00	-0.00	0.02	0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1004

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 794

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 252

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 238

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 229

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 115

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 61

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 31

CWM

PFM

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000763.1	ESR1	ENCSR000BIY	Ishikawa	Homo sapiens	MA0112.4
BP000765.1	ESR1	ENCSR000BKL	Ishikawa	Homo sapiens	MA0112.4
BP000766.1	ESR1	ENCSR000BKN	T47D	Homo sapiens	MA0112.4
BP000767.1	ESR1	ENCSR000BLL	T47D	Homo sapiens	MA0112.4
BP000768.1	ESR1	ENCSR000BQD	T47D	Homo sapiens	MA0112.4
BP000769.1	ESR1	ENCSR000BQR	Ishikawa	Homo sapiens	MA0112.4
BP000770.1	ESR1	ENCSR463GOT	MCF-7	Homo sapiens	MA0112.4