JASPAR - ESR1 - BP000763.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ESR1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESR1
Model ID:	BP000763.1
Cell line/tissue:	Ishikawa
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0112.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P03372
Source:	ENCSR000BIY
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 7197

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	0.01	-0.00	0.00	-0.00	-0.00	0.03	-0.00	-0.00	0.00	-0.00	0.00	0.04	-0.00	0.00	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.01	0.00	-0.00	-0.00	-0.00	0.07	-0.00	0.00	0.00	0.00	0.01	-0.00	0.00	0.09	0.07	0.01	-0.00	-0.00	0.00	]
G [	0.00	0.00	-0.00	0.01	0.05	0.05	0.01	-0.00	0.01	0.00	0.01	0.01	-0.00	0.10	-0.00	-0.00	-0.00	-0.00	0.01	0.01	0.00	]
T [	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.02	0.00	-0.00	0.00	-0.00	-0.00	0.05	0.00	-0.00	0.00	-0.00	0.02	-0.00	-0.00	0.00	]

Frequency matrix

A [	1891	1834	1730	1790	1695	1651	1560	1732	1879	1762	2012	1901	1597	1687	1874	1648	1896	3420	812	1039	777	33	4230	1087	1359	1623	226	150	5438	23	713	368	1638	1476	1745	1867	1642	1631	1583	1633	1805	1670	1644	1631	1587	1786	1753	1598	1642	1591	]
C [	1733	1779	1860	1916	1766	1953	2019	1893	1767	1687	1626	1679	1911	1868	1908	2298	2164	634	51	171	934	5988	212	2153	1939	1921	939	30	1469	7047	6169	2377	1381	1493	1707	1949	2192	1971	1902	1832	1776	1838	2079	2058	2067	1886	1938	2010	1942	2041	]
G [	1928	1834	1954	1890	1922	2048	1794	1783	1844	1972	2046	1958	1954	1865	1890	1792	1672	2394	5516	5587	2560	237	1887	2011	2412	2746	31	7016	164	3	3	322	2379	2641	2165	1784	1813	1576	1905	1839	1897	2073	1784	1765	1886	1829	1844	1868	1803	1753	]
T [	1645	1750	1653	1601	1814	1545	1824	1789	1707	1776	1513	1659	1735	1777	1525	1459	1465	749	818	400	2926	939	868	1946	1487	907	6001	1	126	124	312	4130	1799	1587	1580	1597	1550	2019	1807	1893	1719	1616	1690	1743	1657	1696	1662	1721	1810	1812	]

Hypothetical CWM

A [	-0.01	0.00	-0.00	-0.00	0.02	-0.01	-0.00	-0.02	-0.07	0.04	-0.00	-0.00	0.00	-0.04	0.01	0.05	-0.02	0.00	-0.04	-0.00	-0.00	-0.00	0.00	]
C [	0.00	0.00	0.01	0.02	-0.00	-0.07	-0.05	-0.02	0.08	-0.05	0.02	0.01	0.00	0.05	-0.04	0.02	0.09	0.08	0.03	-0.00	-0.00	0.01	0.00	]
G [	-0.00	0.01	0.00	-0.00	0.02	0.07	0.06	0.02	-0.03	0.04	0.01	0.02	0.02	-0.06	0.10	-0.03	-0.06	-0.09	-0.01	0.02	0.02	0.00	0.00	]
T [	0.00	-0.01	-0.00	-0.00	-0.03	-0.00	-0.02	0.03	0.02	-0.03	0.00	-0.01	-0.00	0.06	-0.08	-0.03	-0.01	-0.01	0.03	-0.00	-0.01	0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6382

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1428

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1018

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 631

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 495

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 360

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 209

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 209

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 188

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 185

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 154

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 116

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 85

CWM

PFM

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000764.1	ESR1	ENCSR000BJS	T47D	Homo sapiens	MA0112.4
BP000765.1	ESR1	ENCSR000BKL	Ishikawa	Homo sapiens	MA0112.4
BP000766.1	ESR1	ENCSR000BKN	T47D	Homo sapiens	MA0112.4
BP000767.1	ESR1	ENCSR000BLL	T47D	Homo sapiens	MA0112.4
BP000768.1	ESR1	ENCSR000BQD	T47D	Homo sapiens	MA0112.4
BP000769.1	ESR1	ENCSR000BQR	Ishikawa	Homo sapiens	MA0112.4
BP000770.1	ESR1	ENCSR463GOT	MCF-7	Homo sapiens	MA0112.4