JASPAR - ESR1 - BP000763.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ESR1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESR1
Model ID:	BP000763.1
Cell line/tissue:	Ishikawa
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0112.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P03372
Source:	ENCSR000BIY
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 7197

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	0.02	-0.00	0.00	-0.00	0.00	0.05	-0.00	-0.00	0.00	-0.00	0.00	0.02	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.01	0.01	-0.00	-0.00	-0.00	-0.00	0.10	-0.00	0.01	0.01	0.00	0.01	-0.00	0.01	0.05	0.05	0.01	-0.00	0.00	0.00	]
G [	0.00	-0.00	-0.00	0.01	0.07	0.09	0.00	-0.00	0.01	0.00	0.00	0.00	-0.00	0.07	-0.00	-0.00	-0.00	0.00	0.01	0.00	0.00	]
T [	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.04	0.00	-0.00	0.00	-0.00	-0.00	0.03	-0.00	-0.00	0.00	-0.00	0.01	-0.00	-0.00	0.00	]

Frequency matrix

A [	1812	1810	1721	1662	1696	1657	1743	1690	1616	1719	1893	1807	2019	1550	1597	1580	1587	1799	4130	312	124	126	1	6001	907	1487	1946	868	939	2926	400	818	749	1465	1459	1525	1777	1735	1659	1513	1776	1707	1789	1824	1545	1814	1601	1653	1750	1645	]
C [	1753	1803	1868	1844	1829	1886	1765	1784	2073	1897	1839	1905	1576	1813	1784	2165	2641	2379	322	3	3	164	7016	31	2746	2412	2011	1887	237	2560	5587	5516	2394	1672	1792	1890	1865	1954	1958	2046	1972	1844	1783	1794	2048	1922	1890	1954	1834	1928	]
G [	2041	1942	2010	1938	1886	2067	2058	2079	1838	1776	1832	1902	1971	2192	1949	1707	1493	1381	2377	6169	7047	1469	30	939	1921	1939	2153	212	5988	934	171	51	634	2164	2298	1908	1868	1911	1679	1626	1687	1767	1893	2019	1953	1766	1916	1860	1779	1733	]
T [	1591	1642	1598	1753	1786	1587	1631	1644	1670	1805	1633	1583	1631	1642	1867	1745	1476	1638	368	713	23	5438	150	226	1623	1359	1087	4230	33	777	1039	812	3420	1896	1648	1874	1687	1597	1901	2012	1762	1879	1732	1560	1651	1695	1790	1730	1834	1891	]

Hypothetical CWM

A [	-0.01	0.00	-0.01	-0.00	0.03	-0.01	-0.01	-0.03	-0.08	0.06	-0.00	-0.01	0.00	-0.03	0.02	0.03	-0.02	-0.00	-0.03	-0.00	-0.00	-0.01	0.00	]
C [	0.00	0.00	0.02	0.02	-0.01	-0.09	-0.06	-0.03	0.10	-0.06	0.02	0.02	0.01	0.04	-0.03	0.02	0.06	0.07	0.02	-0.00	0.00	0.01	-0.00	]
G [	0.00	0.01	-0.00	-0.00	0.03	0.08	0.09	0.02	-0.04	0.05	0.00	0.01	0.02	-0.05	0.08	-0.02	-0.05	-0.07	-0.00	0.02	0.01	0.00	0.00	]
T [	0.00	-0.00	-0.00	-0.00	-0.04	0.00	-0.02	0.05	0.01	-0.04	0.00	-0.00	-0.00	0.04	-0.07	-0.02	-0.00	-0.01	0.02	-0.00	-0.00	0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6382

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1428

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1018

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 631

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 495

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 360

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 209

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 209

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 188

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 185

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 154

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 116

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 85

CWM

PFM

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000764.1	ESR1	ENCSR000BJS	T47D	Homo sapiens	MA0112.4
BP000765.1	ESR1	ENCSR000BKL	Ishikawa	Homo sapiens	MA0112.4
BP000766.1	ESR1	ENCSR000BKN	T47D	Homo sapiens	MA0112.4
BP000767.1	ESR1	ENCSR000BLL	T47D	Homo sapiens	MA0112.4
BP000768.1	ESR1	ENCSR000BQD	T47D	Homo sapiens	MA0112.4
BP000769.1	ESR1	ENCSR000BQR	Ishikawa	Homo sapiens	MA0112.4
BP000770.1	ESR1	ENCSR463GOT	MCF-7	Homo sapiens	MA0112.4