Detailed information of deep learning profile BP000708.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000708.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR975SSR
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.01 0.00 -0.00 0.00 0.00 0.00 0.05 0.04 0.00 -0.00 0.00 0.00 -0.00 ]
C [ -0.00 -0.00 0.00 0.01 0.02 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 ]
G [ -0.00 -0.00 -0.00 0.00 -0.00 0.06 0.05 0.00 0.00 0.02 -0.00 0.01 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3373 3553 3435 3556 3400 3624 3546 3408 3549 3516 3413 3570 3590 3285 3431 3217 3355 3756 3832 6292 7211 3892 1164 6659 1 9 15615 15495 1848 1947 3218 3642 3329 3467 3124 3151 3306 3109 3352 3394 3380 3561 3275 3287 3388 3390 3307 3374 3451 3524 ]
C [ 4340 4331 4391 4305 4448 4437 4385 4532 4345 4196 4357 4309 4199 4562 4506 4780 4872 4631 3831 2766 2187 5450 10688 8658 0 3 2 12 1004 3884 2883 4129 4982 3791 4337 4607 4122 4376 4513 4233 4502 4343 4261 4300 4376 4325 4525 4461 4226 4260 ]
G [ 4940 4756 4817 4828 4872 4641 4792 4806 4725 4821 4908 4784 4828 4779 4704 4784 4655 4616 5718 4205 3219 3817 3514 319 15644 15633 18 5 12753 1435 7682 6158 4776 5118 5178 4653 4897 5088 4822 4892 4856 4739 5023 5112 4766 4984 4855 4676 4866 4872 ]
T [ 2992 3005 3002 2956 2925 2943 2922 2899 3026 3112 2967 2982 3028 3019 3004 2864 2763 2642 2264 2382 3028 2486 279 9 0 0 10 133 40 8379 1862 1716 2558 3269 3006 3234 3320 3072 2958 3126 2907 3002 3086 2946 3115 2946 2958 3134 3102 2989 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 0.00 -0.00 0.01 -0.02 -0.02 0.05 0.04 0.01 -0.01 0.00 0.00 0.00 0.00 ]
C [ 0.00 -0.00 -0.01 0.01 0.02 0.04 -0.02 -0.02 -0.02 -0.01 -0.00 0.01 0.00 0.01 0.00 0.00 ]
G [ 0.01 0.00 -0.00 -0.01 0.01 -0.01 0.06 0.05 -0.02 -0.03 0.02 -0.01 0.01 0.01 0.01 0.00 ]
T [ -0.00 0.00 0.01 0.00 -0.02 -0.04 -0.03 -0.02 -0.01 0.00 -0.02 0.02 -0.01 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 760

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 274

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 178

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 117

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 113

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 89

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 27

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages