Detailed information of deep learning profile BP000708.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000708.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR975SSR
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.01 -0.00 0.02 0.00 0.00 0.05 0.06 -0.00 0.00 -0.00 -0.00 -0.00 ]
G [ 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.02 0.01 0.00 -0.00 -0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.00 0.04 0.05 0.00 0.00 0.00 -0.00 0.00 0.01 0.00 ]

Frequency matrix

       
A [ 2989 3102 3134 2958 2946 3115 2946 3086 3002 2907 3126 2958 3072 3320 3234 3006 3269 2558 1716 1862 8379 40 133 10 0 0 9 279 2486 3028 2382 2264 2642 2763 2864 3004 3019 3028 2982 2967 3112 3026 2899 2922 2943 2925 2956 3002 3005 2992 ]
C [ 4872 4866 4676 4855 4984 4766 5112 5023 4739 4856 4892 4822 5088 4897 4653 5178 5118 4776 6158 7682 1435 12753 5 18 15633 15644 319 3514 3817 3219 4205 5718 4616 4655 4784 4704 4779 4828 4784 4908 4821 4725 4806 4792 4641 4872 4828 4817 4756 4940 ]
G [ 4260 4226 4461 4525 4325 4376 4300 4261 4343 4502 4233 4513 4376 4122 4607 4337 3791 4982 4129 2883 3884 1004 12 2 3 0 8658 10688 5450 2187 2766 3831 4631 4872 4780 4506 4562 4199 4309 4357 4196 4345 4532 4385 4437 4448 4305 4391 4331 4340 ]
T [ 3524 3451 3374 3307 3390 3388 3287 3275 3561 3380 3394 3352 3109 3306 3151 3124 3467 3329 3642 3218 1947 1848 15495 15615 9 1 6659 1164 3892 7211 6292 3832 3756 3355 3217 3431 3285 3590 3570 3413 3516 3549 3408 3546 3624 3400 3556 3435 3553 3373 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 -0.01 0.02 -0.02 0.00 -0.01 -0.02 -0.03 -0.04 -0.02 0.00 0.01 0.00 -0.00 ]
C [ 0.00 0.01 0.01 0.01 -0.01 0.02 -0.03 -0.02 0.05 0.06 -0.01 0.01 -0.01 -0.00 0.00 0.01 ]
G [ 0.00 0.00 0.01 0.00 0.01 -0.00 -0.01 -0.02 -0.02 -0.02 0.04 0.02 0.01 -0.01 -0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.01 0.01 0.04 0.05 -0.02 -0.02 0.01 -0.00 0.00 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 760

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 274

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 178

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 117

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 113

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 89

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 27

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages