Detailed information of deep learning profile BP000706.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000706.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR744CXJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.01 -0.00 0.02 0.00 0.00 0.04 0.05 -0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.03 0.01 0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.00 0.03 0.04 0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 ]

Frequency matrix

       
A [ 1664 1643 1653 1580 1667 1632 1564 1618 1580 1570 1664 1581 1611 1675 1811 1543 1696 1401 848 970 4653 44 138 26 3 1 10 102 1251 1668 1297 1196 1483 1457 1421 1513 1489 1493 1671 1588 1640 1584 1537 1549 1551 1500 1610 1570 1567 1581 ]
C [ 3183 3314 3126 3296 3289 3257 3366 3341 3312 3263 3277 3182 3316 3303 3034 3453 3522 3028 4182 4951 913 7625 4 55 9510 9515 97 2365 2802 2439 3032 3716 3014 2982 3208 3142 3029 3280 3066 3290 3216 3124 3153 3172 3071 3182 3155 3162 3199 3196 ]
G [ 2888 2810 2974 2964 2810 2890 2963 2895 2920 3014 2839 3040 2967 2826 3029 2986 2523 3375 2734 1958 2771 692 17 10 4 0 7069 6558 3406 1624 2044 2789 3232 3332 3134 3009 3251 2960 3018 2893 2833 2939 3086 2996 2977 3089 2953 3051 2978 2986 ]
T [ 1782 1750 1764 1677 1751 1738 1624 1663 1705 1670 1737 1714 1623 1713 1643 1535 1776 1713 1753 1638 1180 1156 9358 9426 0 1 2341 492 2058 3786 3144 1816 1788 1746 1754 1853 1748 1784 1762 1746 1828 1870 1741 1800 1918 1746 1799 1734 1773 1754 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.01 0.01 -0.02 0.00 -0.00 -0.01 -0.02 -0.03 -0.02 0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.01 -0.01 0.02 -0.02 -0.01 0.04 0.05 -0.01 0.01 -0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.01 -0.00 -0.00 -0.01 -0.01 -0.01 0.03 0.02 0.01 -0.00 -0.00 0.00 ]
T [ 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.03 0.04 -0.02 -0.03 0.00 -0.00 -0.00 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 276

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 251

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 209

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 189

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 145

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 87

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 63

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 21

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages