Detailed information of deep learning profile BP000704.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000704.1
Cell line/tissue: MCF-7
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR502NRF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.01 -0.00 0.02 0.00 0.00 0.07 0.08 -0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.03 0.02 0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.00 0.06 0.06 0.00 0.00 0.01 -0.00 0.00 0.01 0.01 0.00 ]

Frequency matrix

       
A [ 3025 2988 3081 2895 3070 3004 2906 2924 2990 3016 3037 2980 2964 3319 3065 2833 3047 2495 1532 1986 8078 49 186 31 2 0 10 254 2568 3188 2421 2199 2747 2639 2758 2891 2854 2929 2902 2921 3101 2892 2942 2875 2917 2863 2936 2877 3064 2985 ]
C [ 4984 5080 4757 5102 5028 5074 5180 5301 5074 4955 5129 5129 5275 5107 4825 5630 5276 4831 6388 7785 1567 12560 0 6 15819 15825 279 3184 3868 3499 4451 6046 4966 4747 4982 4891 4897 5004 4830 4993 5023 5183 5035 4960 4750 5062 4961 5124 4949 4997 ]
G [ 4654 4533 4754 4846 4522 4540 4634 4546 4614 4734 4496 4665 4603 4415 4941 4306 4112 5265 4980 3052 4342 1095 17 6 5 1 9010 11307 6024 2241 3049 4229 4754 5172 4901 4681 4983 4542 4622 4624 4475 4476 4652 4598 4755 4682 4670 4576 4565 4667 ]
T [ 3163 3225 3234 2983 3206 3208 3106 3055 3148 3121 3164 3052 2984 2985 2995 3057 3391 3235 2926 3003 1839 2122 15623 15783 0 0 6527 1081 3366 6898 5905 3352 3359 3268 3185 3363 3092 3351 3472 3288 3227 3275 3197 3393 3404 3219 3259 3249 3248 3177 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.00 0.02 -0.03 0.00 -0.00 -0.02 -0.03 -0.05 -0.03 0.01 0.01 0.01 -0.00 ]
C [ 0.00 0.01 0.01 0.01 -0.01 0.03 -0.04 -0.03 0.07 0.08 -0.01 0.01 -0.00 -0.00 0.00 0.01 ]
G [ 0.00 0.01 0.01 0.00 0.01 0.00 -0.01 -0.02 -0.02 -0.02 0.05 0.03 0.01 -0.01 -0.00 0.01 ]
T [ 0.00 -0.00 -0.00 0.00 -0.01 0.01 0.06 0.06 -0.03 -0.03 0.02 -0.00 0.01 0.02 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 717

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 231

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 133

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 50

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages