Detailed information of deep learning profile BP000704.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000704.1
Cell line/tissue: MCF-7
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR502NRF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.01 0.01 0.00 -0.00 0.01 0.00 0.00 0.06 0.06 0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 0.00 0.02 0.03 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.08 0.07 0.00 0.00 0.02 -0.00 0.01 0.00 0.00 ]
T [ -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3177 3248 3249 3259 3219 3404 3393 3197 3275 3227 3288 3472 3351 3092 3363 3185 3268 3359 3352 5905 6898 3366 1081 6527 0 0 15783 15623 2122 1839 3003 2926 3235 3391 3057 2995 2985 2984 3052 3164 3121 3148 3055 3106 3208 3206 2983 3234 3225 3163 ]
C [ 4667 4565 4576 4670 4682 4755 4598 4652 4476 4475 4624 4622 4542 4983 4681 4901 5172 4754 4229 3049 2241 6024 11307 9010 1 5 6 17 1095 4342 3052 4980 5265 4112 4306 4941 4415 4603 4665 4496 4734 4614 4546 4634 4540 4522 4846 4754 4533 4654 ]
G [ 4997 4949 5124 4961 5062 4750 4960 5035 5183 5023 4993 4830 5004 4897 4891 4982 4747 4966 6046 4451 3499 3868 3184 279 15825 15819 6 0 12560 1567 7785 6388 4831 5276 5630 4825 5107 5275 5129 5129 4955 5074 5301 5180 5074 5028 5102 4757 5080 4984 ]
T [ 2985 3064 2877 2936 2863 2917 2875 2942 2892 3101 2921 2902 2929 2854 2891 2758 2639 2747 2199 2421 3188 2568 254 10 0 2 31 186 49 8078 1986 1532 2495 3047 2833 3065 3319 2964 2980 3037 3016 2990 2924 2906 3004 3070 2895 3081 2988 3025 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.02 0.01 -0.00 0.02 -0.03 -0.03 0.06 0.06 0.01 -0.01 0.00 -0.00 -0.00 0.00 ]
C [ 0.01 -0.00 -0.01 0.01 0.03 0.05 -0.02 -0.02 -0.02 -0.01 0.00 0.01 0.00 0.01 0.01 0.00 ]
G [ 0.01 0.00 -0.00 -0.00 0.01 -0.01 0.08 0.07 -0.03 -0.04 0.03 -0.01 0.01 0.01 0.01 0.00 ]
T [ -0.00 0.01 0.01 0.01 -0.03 -0.05 -0.03 -0.02 -0.00 0.00 -0.03 0.02 -0.00 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 717

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 231

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 133

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 50

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages