Detailed information of deep learning profile BP000702.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000702.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR321VGW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.01 0.01 0.00 -0.00 0.00 0.00 0.00 0.06 0.06 0.00 -0.00 0.00 -0.00 0.00 ]
C [ -0.00 -0.00 0.00 0.02 0.04 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.00 -0.00 -0.00 0.00 -0.00 0.08 0.07 0.00 0.00 0.03 -0.00 0.01 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2374 2408 2401 2484 2422 2510 2456 2357 2496 2356 2477 2556 2518 2331 2406 2267 2442 2484 2556 4390 5186 2829 584 4269 1 1 11415 11332 1355 1323 2300 2404 2481 2553 2242 2163 2258 2174 2316 2389 2340 2364 2317 2341 2426 2404 2247 2343 2397 2395 ]
C [ 3325 3265 3315 3242 3429 3372 3296 3425 3276 3199 3261 3361 3212 3511 3410 3726 3662 3390 3109 2200 1606 4150 8551 7076 1 5 6 6 765 3020 2112 3199 3719 2889 3112 3471 3022 3224 3417 3146 3395 3237 3137 3274 3155 3234 3390 3410 3194 3249 ]
G [ 3503 3482 3580 3567 3498 3361 3569 3486 3455 3541 3514 3389 3547 3405 3517 3389 3273 3602 4150 3104 2380 2838 2186 86 11436 11429 7 3 9275 996 5580 4671 3423 3720 3974 3500 3705 3832 3547 3637 3504 3634 3762 3713 3650 3612 3616 3421 3609 3594 ]
T [ 2236 2283 2142 2145 2089 2195 2117 2170 2211 2342 2186 2132 2161 2191 2105 2056 2061 1962 1623 1744 2266 1621 117 7 0 3 10 97 43 6099 1446 1164 1815 2276 2110 2304 2453 2208 2158 2266 2199 2203 2222 2110 2207 2188 2185 2264 2238 2200 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.02 0.00 -0.00 0.01 -0.03 -0.02 0.06 0.06 0.01 -0.00 0.01 -0.00 0.00 ]
C [ 0.01 -0.00 -0.01 0.01 0.03 0.06 -0.02 -0.02 -0.01 -0.01 0.00 0.02 0.00 0.01 0.01 ]
G [ 0.01 0.00 -0.00 -0.00 0.01 -0.01 0.08 0.07 -0.02 -0.03 0.03 -0.01 0.01 0.01 0.01 ]
T [ -0.00 0.00 0.01 0.01 -0.02 -0.05 -0.03 -0.02 -0.00 0.01 -0.02 0.02 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 937

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 366

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 144

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 141

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 110

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages