Detailed information of deep learning profile BP000696.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000696.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BMD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.01 0.01 -0.00 0.05 -0.00 0.00 0.11 0.13 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.05 0.04 0.01 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.09 0.10 0.00 0.00 0.01 -0.00 -0.00 0.01 0.01 -0.00 ]

Frequency matrix

       
A [ 4629 4823 4955 4686 4740 4808 4527 4777 4733 4570 4913 4539 4732 5349 4954 4398 4790 3741 2113 2664 13955 38 212 43 4 0 17 367 3724 4412 3572 3293 4363 4296 4751 4639 4883 4634 4826 4661 4808 4869 4546 4636 4724 4541 4742 4621 4655 4712 ]
C [ 7801 7801 7460 7626 7706 7632 8020 8001 7900 7909 7558 7569 7965 8076 7592 8580 8253 7762 10836 12710 2182 20729 6 8 24672 24678 396 5067 6036 5319 6620 9451 7446 7368 7487 7564 7535 7764 7343 7583 7819 7450 7639 7722 7383 7422 7664 7680 7518 7736 ]
G [ 6825 6666 6980 7323 6822 6826 6857 6789 6626 7046 6906 7176 7068 6400 7271 6820 6304 8223 6869 4568 5933 1398 11 10 2 0 12569 17697 8902 3429 4329 6103 7110 7776 7482 7293 7161 6684 6806 6923 6582 6829 7048 6859 6746 7076 6719 6839 6630 6852 ]
T [ 5423 5388 5283 5043 5410 5412 5274 5111 5419 5153 5301 5394 4913 4853 4861 4880 5331 4952 4860 4736 2608 2513 24449 24617 0 0 11696 1547 6016 11518 10157 5831 5759 5238 4958 5182 5099 5596 5703 5511 5469 5530 5445 5461 5825 5639 5553 5538 5875 5378 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.02 -0.01 0.04 -0.05 0.00 -0.00 -0.03 -0.06 -0.08 -0.04 0.01 0.01 0.00 -0.00 ]
C [ 0.01 0.02 0.03 0.03 -0.02 0.05 -0.05 -0.05 0.11 0.13 -0.01 0.02 0.00 0.00 0.00 0.02 ]
G [ 0.01 0.02 0.02 0.01 0.03 0.00 -0.02 -0.03 -0.02 -0.03 0.09 0.05 0.02 -0.01 -0.00 0.01 ]
T [ -0.00 -0.01 -0.01 0.00 -0.01 0.02 0.09 0.10 -0.05 -0.04 0.02 -0.01 0.00 0.03 0.02 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1549

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 728

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 118

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 22

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 21

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages