Detailed information of deep learning profile BP000696.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000696.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BMD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.01 0.01 -0.00 -0.00 0.01 0.00 0.00 0.10 0.09 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 0.01 0.04 0.05 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.13 0.11 0.00 -0.00 0.05 -0.00 0.01 0.01 0.00 ]
T [ -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 5378 5875 5538 5553 5639 5825 5461 5445 5530 5469 5511 5703 5596 5099 5182 4958 5238 5759 5831 10157 11518 6016 1547 11696 0 0 24617 24449 2513 2608 4736 4860 4952 5331 4880 4861 4853 4913 5394 5301 5153 5419 5111 5274 5412 5410 5043 5283 5388 5423 ]
C [ 6852 6630 6839 6719 7076 6746 6859 7048 6829 6582 6923 6806 6684 7161 7293 7482 7776 7110 6103 4329 3429 8902 17697 12569 0 2 10 11 1398 5933 4568 6869 8223 6304 6820 7271 6400 7068 7176 6906 7046 6626 6789 6857 6826 6822 7323 6980 6666 6825 ]
G [ 7736 7518 7680 7664 7422 7383 7722 7639 7450 7819 7583 7343 7764 7535 7564 7487 7368 7446 9451 6620 5319 6036 5067 396 24678 24672 8 6 20729 2182 12710 10836 7762 8253 8580 7592 8076 7965 7569 7558 7909 7900 8001 8020 7632 7706 7626 7460 7801 7801 ]
T [ 4712 4655 4621 4742 4541 4724 4636 4546 4869 4808 4661 4826 4634 4883 4639 4751 4296 4363 3293 3572 4412 3724 367 17 0 4 43 212 38 13955 2664 2113 3741 4790 4398 4954 5349 4732 4539 4913 4570 4733 4777 4527 4808 4740 4686 4955 4823 4629 ]

Hypothetical CWM

   
A [ 0.00 0.02 0.03 0.00 -0.01 0.02 -0.04 -0.05 0.10 0.09 0.02 -0.01 0.00 -0.01 -0.01 -0.00 ]
C [ 0.01 -0.00 -0.01 0.02 0.05 0.09 -0.03 -0.02 -0.03 -0.02 0.00 0.03 0.01 0.02 0.02 0.01 ]
G [ 0.02 0.00 0.00 0.00 0.02 -0.01 0.13 0.11 -0.05 -0.05 0.05 -0.02 0.03 0.03 0.02 0.01 ]
T [ -0.00 0.00 0.01 0.01 -0.04 -0.08 -0.06 -0.03 -0.00 0.00 -0.05 0.04 -0.01 -0.02 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1549

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 728

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 118

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 22

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 21

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages