Detailed information of deep learning profile BP000694.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000694.1
Cell line/tissue: MCF-7
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR897JAS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 0.00 -0.00 0.08 0.00 0.01 0.00 0.00 0.06 -0.00 0.00 0.01 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.11 -0.00 0.00 0.07 0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.08 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.01 0.00 -0.00 0.07 0.00 0.00 0.00 -0.00 0.06 -0.00 0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1968 2085 2256 2271 2172 2176 2043 2061 1980 1967 2045 2076 1988 2369 2085 2360 2046 1359 1661 4403 13 15 7130 4 5930 159 64 7098 119 2280 2854 2099 2044 2063 2026 1959 2063 2145 2211 2246 2116 2215 1912 2062 2034 2023 2127 1913 2104 2249 ]
C [ 1615 1519 1463 1412 1442 1582 1504 1565 1705 1678 1569 1659 1511 1399 1674 1590 1594 1866 946 339 20 16 0 7139 1169 42 7051 7 2783 2298 1176 1628 1592 1548 1620 1695 1547 1560 1519 1323 1612 1570 1572 1601 1567 1588 1446 1654 1596 1456 ]
G [ 1593 1498 1525 1481 1490 1400 1448 1442 1305 1432 1395 1401 1636 1492 1454 1444 1467 1092 2128 2346 7 7038 17 8 8 30 30 31 402 821 1712 1373 1399 1433 1297 1397 1442 1357 1507 1460 1385 1386 1445 1343 1390 1371 1451 1505 1533 1478 ]
T [ 1983 2057 1915 1995 2055 2001 2164 2091 2169 2082 2150 2023 2024 1899 1946 1765 2052 2842 2424 71 7119 90 12 8 52 6928 14 23 3855 1760 1417 2059 2124 2115 2216 2108 2107 2097 1922 2130 2046 1988 2230 2153 2168 2177 2135 2087 1926 1976 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.01 0.03 -0.06 -0.04 0.08 -0.08 0.01 -0.02 -0.00 0.06 -0.04 0.00 0.01 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.01 0.01 -0.02 -0.08 0.11 -0.03 -0.03 0.07 -0.04 0.03 0.02 0.00 0.01 0.01 ]
G [ 0.00 0.01 0.00 0.02 0.03 -0.06 0.08 -0.05 -0.02 0.12 -0.06 -0.01 0.01 -0.01 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.01 0.01 -0.04 0.07 -0.01 -0.01 0.01 -0.09 0.06 -0.04 -0.05 0.03 -0.01 -0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 10195

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 4116

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 3810

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1336

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 764

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 364

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 294

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 246

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 230

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 221

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 158

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 127

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 58

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 55

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_22

Num. of seqlets: 20

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages